Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq265 114 9e-21
seq5307 104 2e-17
seq920 100 2e-16
seq331 100 2e-16
seq808 95.1 8e-15
seq71 95.1 8e-15
seq717 93.3 3e-14
seq647 91.5 1e-13
seq376 84.2 1e-11
>seq265
Length=2261556
Score = 114 bits (126), Expect = 9e-21
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| |||||||| || || || || ||||| ||||| ||||| ||
Sbjct 840913 AAGATGCAGATTTTCGTGAAAACCCTTACCGGGAAGACCATCACCCTCGAGGTTGAACCC 840972
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| || | |||| |||| || || || || ||||| | || || |||
Sbjct 840973 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 841032
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | || ||||| ||||| ||||||||||| | ||| ||||| || |||
Sbjct 841033 CAGCAAAGACCGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 841092
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
||||| ||||| |||||||| | ||| | || || ||
Sbjct 841093 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAG 841130
>seq5307
Length=1324
Score = 104 bits (114), Expect = 2e-17
Identities = 165/233 (71%), Gaps = 3/233 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || ||||| ||||| || || ||||| || || || || |||
Sbjct 729 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACACTTGAGGTCGAGCCCAGT 788
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| |||| ||| ||| | |||| | ||||| || || | || || || ||
Sbjct 789 GACACTATTGAGAATGCCAAAGCTAAAA-TCCAAGACAAGGAGGGCATCCCACCTGACCA 847
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || ||||| |||||||| ||||| || | |||||| | || || ||
Sbjct 848 GCAGCGTCTGATTTTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTATAA 907
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG-ATCA 23841
|| || ||||||||||| |||| || || | | ||||||| || ||||
Sbjct 908 TATCCAGAAAGAGTCCACTCTACACTTGGTGCTTCGTCTGCGAGGTGGTATCA 960
>seq920
Length=534542
Score = 100 bits (110), Expect = 2e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| |||||||| || || || || ||||| ||| | ||||| ||
Sbjct 150233 AAGATGCAGATTTTCGTGAAAACCCTTACTGGGAAGACCATCACCCTCAAGGTTGAACCC 150174
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| || |||| |||| || || | || ||||| | || || |||
Sbjct 150173 TCGGATACAAAAGAAAATGTAAAGGCCAAGATCCAGAATAAGGAAGGAATTCCTCCTGAT 150114
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | | || ||||| ||||| ||||||||||| | ||| ||||| || |||
Sbjct 150113 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 150054
Query 23788 AACATACAAAAAGAGTCCAC 23807
||||| ||||| |||| |||
Sbjct 150053 AACATTCAAAAGGAGTTCAC 150034
>seq331
Length=2147541
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| |||||| | || || || || ||||| ||| | | ||| ||
Sbjct 851239 AAGATGCAGATTTTCGTGAAAACCTTTACCGGGAAGACCATCACCCTCAAGGCTGAACCC 851298
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| || | |||| |||| || || || || ||||| | || || |||
Sbjct 851299 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 851358
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | || ||||| ||||| ||||||||||| | ||| ||||| || |||
Sbjct 851359 CAGCAAAGACAGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 851418
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
||||| ||||| |||||||| | ||| | || || ||
Sbjct 851419 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAG 851456
>seq808
Length=762264
Score = 95.1 bits (104), Expect = 8e-15
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||| | |||||||| || || || || ||||| ||||| ||||| || |
Sbjct 447812 ATGCAGATTTTCATGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACCCTCA 447871
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || | |||| |||| || || || || ||||| | || || |||||
Sbjct 447872 GATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 447931
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| | | || ||||| ||||| ||||||||||| | || | || || ||||||
Sbjct 447932 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACATATCTTGTCTGACTACAAC 447991
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
|| ||||| |||||||| | ||| | || || ||
Sbjct 447992 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAG 448026
>seq71
Length=4921646
Score = 95.1 bits (104), Expect = 8e-15
Identities = 152/218 (70%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| |||||||| | || || ||||||||| ||||| ||
Sbjct 1110431 AAGATGCAGATTTTCGTGAAAACCCTGGCTCTGAAGACCATCACTCTCACGGTTGAACCC 1110372
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| || | |||| |||| || || | || ||||| | || || |||
Sbjct 1110371 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGAATAAGGAAGGAATTCCTCCTGAT 1110312
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | |||| ||||| ||||| |||||||||| | ||| ||||| | ||||
Sbjct 1110311 CAGCAAAGACTAATCTTTGCTGGCAAGTAACTGGAAGAGGGACGTACTTT----GGTTAC 1110256
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
||||| ||||| |||||||| | ||| | || || ||
Sbjct 1110255 AACATTCAAAAGGAGTCCACTCTTCATCTTGTATTGAG 1110218
>seq717
Length=839118
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || ||||| ||||| || || ||||| || || || || |||
Sbjct 563669 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACACTTGAGGTCGAGCCCAGT 563610
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| |||| ||| | ||| | |||| | ||||| || || | || || || ||
Sbjct 563609 GACACTATTGAGAATGTCAAAGCTAAAA-TCCAAGACAAGGAGGGCATCCCACCTGACCA 563551
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | | || ||||| |||||||| ||||| || | |||||| | || | ||
Sbjct 563550 GCAGCATCTGATTTTTGCAGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTGTAA 563491
Query 23790 CATACAAAAAGAGTCCAC 23807
|| || |||||||||||
Sbjct 563490 TATCCAGAAAGAGTCCAC 563473
>seq647
Length=1105866
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||| | |||| || || || || || ||||||| || | ||| ||
Sbjct 850048 AAGATGCAGATTTTCATGGAAACGCTTACTGGGAAGACCGTCACTCTTGAGGCTGAACCC 850107
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| || || | |||| |||| || || || || ||||| | || || |||
Sbjct 850108 TCAGATACAATAGAAAATGTAAAGGTCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 850167
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | | || ||| | ||||| ||||||||||| | ||||||||| || |||
Sbjct 850168 CAGCAAAGACTGATCTTTACTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTAC 850227
Query 23788 AACATACAAAAAGAGTCCAC 23807
||||| ||||| ||||||||
Sbjct 850228 AACATTCAAAAGGAGTCCAC 850247
>seq376
Length=1527771
Score = 84.2 bits (92), Expect = 1e-11
Identities = 146/213 (69%), Gaps = 7/213 (3%)
Strand=Plus/Plus
Query 23613 GCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGA 23672
|||||||||||| || ||||| || || || || ||||| || || ||||| || ||||
Sbjct 1196292 GCAGATTTTCGTGAAGACCCTTACTGGGAAGACCATCACCCTGGAGGTTGAACCCTCGGA 1196351
Query 23673 CACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACA 23732
|| | |||| |||| | || || ||||| | || || ||||| ||
Sbjct 1196352 TACAATAGAAAATGTAAAGGCCAGGAT-------AAGGAAGGAATTCCTCCTGATCAGCA 1196404
Query 23733 GCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACAT 23792
| | || ||| | ||||| ||||||||||| | || ||||| || ||||||||
Sbjct 1196405 AAGACTGATCTTTACTGGCAAGCAACTGGAAGATGGACATACTTTGTCTGACTACAACAT 1196464
Query 23793 ACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
||||| |||||||| | ||| | || || ||
Sbjct 1196465 TCAAAAGGAGTCCACTCTTCATCTTGTGTTGAG 1196497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337978411326068
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |