Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq265 114 9e-21 seq5307 104 2e-17 seq920 100 2e-16 seq331 100 2e-16 seq808 95.1 8e-15 seq71 95.1 8e-15 seq717 93.3 3e-14 seq647 91.5 1e-13 seq376 84.2 1e-11 >seq265 Length=2261556 Score = 114 bits (126), Expect = 9e-21 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| |||||||| || || || || ||||| ||||| ||||| || Sbjct 840913 AAGATGCAGATTTTCGTGAAAACCCTTACCGGGAAGACCATCACCCTCGAGGTTGAACCC 840972 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || | |||| |||| || || || || ||||| | || || ||| Sbjct 840973 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 841032 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | || ||||| ||||| ||||||||||| | ||| ||||| || ||| Sbjct 841033 CAGCAAAGACCGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 841092 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 ||||| ||||| |||||||| | ||| | || || || Sbjct 841093 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAG 841130 >seq5307 Length=1324 Score = 104 bits (114), Expect = 2e-17 Identities = 165/233 (71%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||| ||||| || || ||||| || || || || ||| Sbjct 729 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACACTTGAGGTCGAGCCCAGT 788 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| ||| ||| | |||| | ||||| || || | || || || || Sbjct 789 GACACTATTGAGAATGCCAAAGCTAAAA-TCCAAGACAAGGAGGGCATCCCACCTGACCA 847 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || ||||| |||||||| ||||| || | |||||| | || || || Sbjct 848 GCAGCGTCTGATTTTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTATAA 907 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG-ATCA 23841 || || ||||||||||| |||| || || | | ||||||| || |||| Sbjct 908 TATCCAGAAAGAGTCCACTCTACACTTGGTGCTTCGTCTGCGAGGTGGTATCA 960 >seq920 Length=534542 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| |||||||| || || || || ||||| ||| | ||||| || Sbjct 150233 AAGATGCAGATTTTCGTGAAAACCCTTACTGGGAAGACCATCACCCTCAAGGTTGAACCC 150174 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || |||| |||| || || | || ||||| | || || ||| Sbjct 150173 TCGGATACAAAAGAAAATGTAAAGGCCAAGATCCAGAATAAGGAAGGAATTCCTCCTGAT 150114 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| ||||| ||||||||||| | ||| ||||| || ||| Sbjct 150113 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 150054 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| ||||| |||| ||| Sbjct 150053 AACATTCAAAAGGAGTTCAC 150034 >seq331 Length=2147541 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| |||||| | || || || || ||||| ||| | | ||| || Sbjct 851239 AAGATGCAGATTTTCGTGAAAACCTTTACCGGGAAGACCATCACCCTCAAGGCTGAACCC 851298 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || | |||| |||| || || || || ||||| | || || ||| Sbjct 851299 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 851358 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | || ||||| ||||| ||||||||||| | ||| ||||| || ||| Sbjct 851359 CAGCAAAGACAGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 851418 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 ||||| ||||| |||||||| | ||| | || || || Sbjct 851419 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAG 851456 >seq808 Length=762264 Score = 95.1 bits (104), Expect = 8e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||| | |||||||| || || || || ||||| ||||| ||||| || | Sbjct 447812 ATGCAGATTTTCATGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACCCTCA 447871 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | |||| |||| || || || || ||||| | || || ||||| Sbjct 447872 GATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 447931 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | | || ||||| ||||| ||||||||||| | || | || || |||||| Sbjct 447932 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACATATCTTGTCTGACTACAAC 447991 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 || ||||| |||||||| | ||| | || || || Sbjct 447992 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAG 448026 >seq71 Length=4921646 Score = 95.1 bits (104), Expect = 8e-15 Identities = 152/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| |||||||| | || || ||||||||| ||||| || Sbjct 1110431 AAGATGCAGATTTTCGTGAAAACCCTGGCTCTGAAGACCATCACTCTCACGGTTGAACCC 1110372 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || | |||| |||| || || | || ||||| | || || ||| Sbjct 1110371 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGAATAAGGAAGGAATTCCTCCTGAT 1110312 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | |||| ||||| ||||| |||||||||| | ||| ||||| | |||| Sbjct 1110311 CAGCAAAGACTAATCTTTGCTGGCAAGTAACTGGAAGAGGGACGTACTTT----GGTTAC 1110256 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 ||||| ||||| |||||||| | ||| | || || || Sbjct 1110255 AACATTCAAAAGGAGTCCACTCTTCATCTTGTATTGAG 1110218 >seq717 Length=839118 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||| ||||| || || ||||| || || || || ||| Sbjct 563669 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACACTTGAGGTCGAGCCCAGT 563610 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| ||| | ||| | |||| | ||||| || || | || || || || Sbjct 563609 GACACTATTGAGAATGTCAAAGCTAAAA-TCCAAGACAAGGAGGGCATCCCACCTGACCA 563551 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || ||||| |||||||| ||||| || | |||||| | || | || Sbjct 563550 GCAGCATCTGATTTTTGCAGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTGTAA 563491 Query 23790 CATACAAAAAGAGTCCAC 23807 || || ||||||||||| Sbjct 563490 TATCCAGAAAGAGTCCAC 563473 >seq647 Length=1105866 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||| | |||| || || || || || ||||||| || | ||| || Sbjct 850048 AAGATGCAGATTTTCATGGAAACGCTTACTGGGAAGACCGTCACTCTTGAGGCTGAACCC 850107 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || || | |||| |||| || || || || ||||| | || || ||| Sbjct 850108 TCAGATACAATAGAAAATGTAAAGGTCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 850167 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||| | ||||| ||||||||||| | ||||||||| || ||| Sbjct 850168 CAGCAAAGACTGATCTTTACTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTAC 850227 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| ||||| |||||||| Sbjct 850228 AACATTCAAAAGGAGTCCAC 850247 >seq376 Length=1527771 Score = 84.2 bits (92), Expect = 1e-11 Identities = 146/213 (69%), Gaps = 7/213 (3%) Strand=Plus/Plus Query 23613 GCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGA 23672 |||||||||||| || ||||| || || || || ||||| || || ||||| || |||| Sbjct 1196292 GCAGATTTTCGTGAAGACCCTTACTGGGAAGACCATCACCCTGGAGGTTGAACCCTCGGA 1196351 Query 23673 CACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACA 23732 || | |||| |||| | || || ||||| | || || ||||| || Sbjct 1196352 TACAATAGAAAATGTAAAGGCCAGGAT-------AAGGAAGGAATTCCTCCTGATCAGCA 1196404 Query 23733 GCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACAT 23792 | | || ||| | ||||| ||||||||||| | || ||||| || |||||||| Sbjct 1196405 AAGACTGATCTTTACTGGCAAGCAACTGGAAGATGGACATACTTTGTCTGACTACAACAT 1196464 Query 23793 ACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 ||||| |||||||| | ||| | || || || Sbjct 1196465 TCAAAAGGAGTCCACTCTTCATCTTGTGTTGAG 1196497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337978411326068