Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq808 149 1e-30 seq331 145 2e-29 seq920 131 4e-25 seq376 116 9e-21 seq5307 98.7 2e-15 seq717 95.1 3e-14 seq1324 93.3 1e-13 seq416 93.3 1e-13 seq188 91.5 4e-13 seq187 89.7 1e-12 seq298 87.8 4e-12 seq489 86.0 1e-11 seq172 84.2 5e-11 seq73 84.2 5e-11 >seq808 Length=762264 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| ||||| || |||||||| || ||||| | ||||| || | ||| | Sbjct 448033 ACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGAT 447974 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 |||||||| || ||||| ||||| ||||| |||| ||| || || || ||||| || Sbjct 447973 ATGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCC 447914 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || |||||||| ||| ||| ||| || || ||||||| ||| || || | Sbjct 447913 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAG 447854 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||||| ||||| | ||||| Sbjct 447853 GGTGATGGTCTTCCCAGTAAGGGTTTTCATGAAAATCTGCAT 447812 >seq331 Length=2147541 Score = 145 bits (160), Expect = 2e-29 Identities = 167/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| ||||| || |||||||| || ||||| | ||||| || | |||||| Sbjct 851463 ACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 851404 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || ||||| ||||| ||||| ||| ||| || || || ||||| || Sbjct 851403 ACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGGAATTCC 851344 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || |||||||| ||| ||| ||| || || || |||| ||| | | | Sbjct 851343 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTTGAG 851284 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| || || || ||||| | ||| | ||||| || Sbjct 851283 GGTGATGGTCTTCCCGGTAAAGGTTTTCACGAAAATCTGCATCTT 851239 >seq920 Length=534542 Score = 131 bits (144), Expect = 4e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| |||| || |||||| | || ||||| | ||||| || | |||||| Sbjct 150009 ACGAAGTCTCAACCCAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGT 150068 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || ||||| ||||| ||||| |||| ||| || || || ||||| || Sbjct 150069 ACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCC 150128 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| | |||||||| ||| ||| ||| | || || |||| ||| || | | Sbjct 150129 TTCCTTATTCTGGATCTTGGCCTTTACATTTTCTTTTGTATCCGAGGGTTCAACCTTGAG 150188 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| || || | ||||| | ||| | ||||| || Sbjct 150189 GGTGATGGTCTTCCCAGTAAGGGTTTTCACGAAAATCTGCATCTT 150233 >seq376 Length=1527771 Score = 116 bits (128), Expect = 9e-21 Identities = 144/198 (73%), Gaps = 7/198 (4%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| ||||| || |||||||| || ||||| | ||||| || | |||||| Sbjct 1196504 ACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 1196445 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 |||||||| || ||||| |||| ||||| |||| ||| || || || ||||| || Sbjct 1196444 ATGTCCATCTTCCAGTTGCTTGCCAGTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCC 1196385 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || ||| ||| ||| ||| || || || |||| ||| || || | Sbjct 1196384 TTCCTTATCCTGG-------CCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCCAG 1196332 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| ||||| || || Sbjct 1196331 GGTGATGGTCTTCCCAGT 1196314 >seq5307 Length=1324 Score = 98.7 bits (108), Expect = 2e-15 Identities = 138/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| |||||||| ||||| |||| ||| || || | | ||| | ||||| Sbjct 940 AGCACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGCGGCCATCC 881 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || || || || || || || ||||| || || || || ||||||||| Sbjct 880 TCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCT 821 Query 225622 TGGATCTTTTGCTTCA-CAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||| ||| |||| || || || ||||| || || || || | ||||| || Sbjct 820 TGGAT-TTTAGCTTTGGCATTCTCAATAGTGTCACTGGGCTCGACCTCAAGTGTGATGGT 762 Query 225681 CTTGCCCGTCA 225691 ||||||||||| Sbjct 761 CTTGCCCGTCA 751 >seq717 Length=839118 Score = 95.1 bits (104), Expect = 3e-14 Identities = 137/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| |||||||| ||||| |||| ||| | || | | ||| | ||||| Sbjct 563458 AGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTACAGTCTGAGAGAGTGCGGCCATCC 563517 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || || || || || | || ||||| || || || || ||||||||| Sbjct 563518 TCCAGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCT 563577 Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||| ||| || || ||| || || ||||| || || || || | ||||| || Sbjct 563578 TGGAT-TTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCAAGTGTGATGGT 563636 Query 225681 CTTGCCCGTCA 225691 ||||||||||| Sbjct 563637 CTTGCCCGTCA 563647 >seq1324 Length=326099 Score = 93.3 bits (102), Expect = 1e-13 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| || || |||||||| ||||| || ||||| || || || |||||||| |||||||| Sbjct 43818 GAAGATCTGTCCATCAGTGATAGAAATGACATTGGTTGGAATGTAAGCAGACACATCACC 43759 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578 ||||| ||||| | || ||||| || || | || |||||||||||| Sbjct 43758 AGCTTGAGTTTCTATGACTGGTAAAGCAGTCAAAGAGCCACCACCAAAA 43710 >seq416 Length=1521731 Score = 93.3 bits (102), Expect = 1e-13 Identities = 158/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| |||||||| |||||||| || | | | | ||||| || | |||||| Sbjct 880266 ACGAAGTCTCAACACAAGGTGAAGAGTGGACTCCTGTGGAATGTTGTAGTCAGACAAAGT 880325 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || | || || | ||||| ||| | |||| ||| || | || ||||| || Sbjct 880326 GCGTCCCGCTGCCAGTTGTCTGCCAGCAAAGCTCAGTCTTTGCTGAACAGGAGGAATTCC 880385 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTG--AGGTTTCCACGTCT 225669 |||||| | |||||||| ||| || ||| || ||| | ||| ||| || || Sbjct 880386 TTCCTTAACCTGGATCTTGACCTTTCCATTTTC--TGTTGTACGCAAGGGTTCAACCTCG 880443 Query 225670 AACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 | || || || || || || | ||||| ||||| | |||||| || Sbjct 880444 AGAGTAATGGTTTTTCCAGTAAGGGTTTTCATGAAAATTTGCATCTT 880490 >seq188 Length=3041327 Score = 91.5 bits (100), Expect = 4e-13 Identities = 156/225 (69%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 || |||||||| ||||| || ||| |||| || ||| | | ||||| | ||||| Sbjct 1142742 ACAAAGTCTCAACACAAGATGAAGAATGGACTCCTTTGGAATGTTGTAGTA----AAAGT 1142797 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||| |||| || | |||| ||| || | ||| ||| || | || ||||| || Sbjct 1142798 GCATCCAGCTTCCAGTTACTTC--AGCAAACCTCAGTATTTGCTGAGCAGGAGGAATCCC 1142855 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || ||||||| ||| ||| ||| || || ||||||||||| | || | Sbjct 1142856 TTCCTTATCCCGGATCTTGGCCTTTACATGTTCTATTGTATCTGAGGTTTCAGCCTCGAG 1142915 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || || || |||| ||||| | ||| | ||||| || Sbjct 1142916 GGTGATGGTTTTCCCAGTCAGGGTTTTCACGAAAATCTGCATCTT 1142960 >seq187 Length=3141509 Score = 89.7 bits (98), Expect = 1e-12 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 4477 TGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCTGCTTGT 4536 || |||||||| ||||| || ||||| || || || |||||||| |||||||| ||||| Sbjct 261835 TGTCCATCAGTGATAGAAATGACATTGGTTGGAATGTAAGCAGACACATCACCAGCTTGA 261894 Query 4537 GTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578 ||||| | || ||||| || || | || |||||||||||| Sbjct 261895 GTTTCTATGACTGGTAACGCAGTCAAAGAGCCACCACCAAAA 261936 >seq298 Length=2265018 Score = 87.8 bits (96), Expect = 4e-12 Identities = 136/191 (71%), Gaps = 5/191 (3%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| |||||||| ||||| |||| ||| || || | | ||| | ||||| Sbjct 584614 AGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTCTAGTCAG--AGAGTGCGGCCATCC 584671 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || | || || || || || ||||| || || || || ||||||||| Sbjct 584672 TCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCT 584731 Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||| ||| || || ||| || || ||||| || || || || ||||| || Sbjct 584732 TGGA--TTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCAGGTGTGATGGT 584789 Query 225681 CTTGCCCGTCA 225691 ||||||||||| Sbjct 584790 CTTGCCCGTCA 584800 >seq489 Length=1366292 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 4477 TGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCTGCTTGT 4536 || |||||||| ||||| || ||||| || || || |||||||| |||||||| |||| Sbjct 650402 TGTCCATCAGTGATAGAAATGACATTGGTTGGAATGTAAGCAGACACATCACCAGCTTCA 650343 Query 4537 GTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578 ||||| | || ||||| || || | || |||||||||||| Sbjct 650342 GTTTCTATCACTGGTAAAGCGGTCAAAGAGCCACCACCAAAA 650301 >seq172 Length=3468991 Score = 84.2 bits (92), Expect = 5e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||| | |||||| || || || |||||||| || || ||||||||||||||||| Sbjct 1110427 GAAGATTTGTCTATCAGTGATGGAAATGACATTTGTTGGAATGTAAGCAGAAACATCACC 1110486 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578 |||||||| || | || ||| | || || | || || |||||||| Sbjct 1110487 AGCTTGTGTGTCTAGGACTGGTGAAGCAGTCAAGGAGCCGTCACCAAAA 1110535 >seq73 Length=4601553 Score = 84.2 bits (92), Expect = 5e-11 Identities = 137/192 (71%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| |||||||| ||||| |||| |||||| | | | ||| ||||| Sbjct 4090085 AGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTGTAGGCTGAGAGAGT----CCATCC 4090030 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || ||| | || || || | | ||||| || || || || ||||||||| Sbjct 4090029 TCCAGCTGTTTGCCAACAAAAATCAGATGCAGCTGGTCAGGTGGGATGCCCTCCTTGTCT 4089970 Query 225622 TGGATCTTTTGC-TTCACA-GCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCG 225679 ||||| ||| || || ||| ||| | | ||||| || || || || | ||||| | Sbjct 4089969 TGGAT-TTTAGCTTTGACATTCTTAG-TAGTGTCACTGGGCTCGACCTCGAGTGTGATGG 4089912 Query 225680 TCTTGCCCGTCA 225691 |||||||||||| Sbjct 4089911 TCTTGCCCGTCA 4089900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192415520374274