Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq808 149 1e-30
seq331 145 2e-29
seq920 131 4e-25
seq376 116 9e-21
seq5307 98.7 2e-15
seq717 95.1 3e-14
seq1324 93.3 1e-13
seq416 93.3 1e-13
seq188 91.5 4e-13
seq187 89.7 1e-12
seq298 87.8 4e-12
seq489 86.0 1e-11
seq172 84.2 5e-11
seq73 84.2 5e-11
>seq808
Length=762264
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| ||||| || |||||||| || ||||| | ||||| || | ||| |
Sbjct 448033 ACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGAT 447974
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|||||||| || ||||| ||||| ||||| |||| ||| || || || ||||| ||
Sbjct 447973 ATGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCC 447914
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || |||||||| ||| ||| ||| || || ||||||| ||| || || |
Sbjct 447913 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAG 447854
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||| || || | ||||| ||||| | |||||
Sbjct 447853 GGTGATGGTCTTCCCAGTAAGGGTTTTCATGAAAATCTGCAT 447812
>seq331
Length=2147541
Score = 145 bits (160), Expect = 2e-29
Identities = 167/225 (74%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| ||||| || |||||||| || ||||| | ||||| || | ||||||
Sbjct 851463 ACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 851404
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| || ||||| ||||| ||||| ||| ||| || || || ||||| ||
Sbjct 851403 ACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGGAATTCC 851344
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || |||||||| ||| ||| ||| || || || |||| ||| | | |
Sbjct 851343 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTTGAG 851284
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| ||||| || || || ||||| | ||| | ||||| ||
Sbjct 851283 GGTGATGGTCTTCCCGGTAAAGGTTTTCACGAAAATCTGCATCTT 851239
>seq920
Length=534542
Score = 131 bits (144), Expect = 4e-25
Identities = 164/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| |||| || |||||| | || ||||| | ||||| || | ||||||
Sbjct 150009 ACGAAGTCTCAACCCAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGT 150068
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| || ||||| ||||| ||||| |||| ||| || || || ||||| ||
Sbjct 150069 ACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCC 150128
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| | |||||||| ||| ||| ||| | || || |||| ||| || | |
Sbjct 150129 TTCCTTATTCTGGATCTTGGCCTTTACATTTTCTTTTGTATCCGAGGGTTCAACCTTGAG 150188
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| ||||| || || | ||||| | ||| | ||||| ||
Sbjct 150189 GGTGATGGTCTTCCCAGTAAGGGTTTTCACGAAAATCTGCATCTT 150233
>seq376
Length=1527771
Score = 116 bits (128), Expect = 9e-21
Identities = 144/198 (73%), Gaps = 7/198 (4%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| ||||| || |||||||| || ||||| | ||||| || | ||||||
Sbjct 1196504 ACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 1196445
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|||||||| || ||||| |||| ||||| |||| ||| || || || ||||| ||
Sbjct 1196444 ATGTCCATCTTCCAGTTGCTTGCCAGTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCC 1196385
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || ||| ||| ||| ||| || || || |||| ||| || || |
Sbjct 1196384 TTCCTTATCCTGG-------CCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCCAG 1196332
Query 225672 CGTGATCGTCTTGCCCGT 225689
||||| ||||| || ||
Sbjct 1196331 GGTGATGGTCTTCCCAGT 1196314
>seq5307
Length=1324
Score = 98.7 bits (108), Expect = 2e-15
Identities = 138/191 (72%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| |||||||| ||||| |||| ||| || || | | ||| | |||||
Sbjct 940 AGCACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGCGGCCATCC 881
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| || || || || || || || || ||||| || || || || |||||||||
Sbjct 880 TCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCT 821
Query 225622 TGGATCTTTTGCTTCA-CAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||| ||| |||| || || || ||||| || || || || | ||||| ||
Sbjct 820 TGGAT-TTTAGCTTTGGCATTCTCAATAGTGTCACTGGGCTCGACCTCAAGTGTGATGGT 762
Query 225681 CTTGCCCGTCA 225691
|||||||||||
Sbjct 761 CTTGCCCGTCA 751
>seq717
Length=839118
Score = 95.1 bits (104), Expect = 3e-14
Identities = 137/191 (72%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| |||||||| ||||| |||| ||| | || | | ||| | |||||
Sbjct 563458 AGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTACAGTCTGAGAGAGTGCGGCCATCC 563517
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| || || || || || || | || ||||| || || || || |||||||||
Sbjct 563518 TCCAGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCT 563577
Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||| ||| || || ||| || || ||||| || || || || | ||||| ||
Sbjct 563578 TGGAT-TTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCAAGTGTGATGGT 563636
Query 225681 CTTGCCCGTCA 225691
|||||||||||
Sbjct 563637 CTTGCCCGTCA 563647
>seq1324
Length=326099
Score = 93.3 bits (102), Expect = 1e-13
Identities = 86/109 (79%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| || || |||||||| ||||| || ||||| || || || |||||||| ||||||||
Sbjct 43818 GAAGATCTGTCCATCAGTGATAGAAATGACATTGGTTGGAATGTAAGCAGACACATCACC 43759
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578
||||| ||||| | || ||||| || || | || ||||||||||||
Sbjct 43758 AGCTTGAGTTTCTATGACTGGTAAAGCAGTCAAAGAGCCACCACCAAAA 43710
>seq416
Length=1521731
Score = 93.3 bits (102), Expect = 1e-13
Identities = 158/227 (70%), Gaps = 4/227 (2%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| |||||||| |||||||| || | | | | ||||| || | ||||||
Sbjct 880266 ACGAAGTCTCAACACAAGGTGAAGAGTGGACTCCTGTGGAATGTTGTAGTCAGACAAAGT 880325
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || | || || | ||||| ||| | |||| ||| || | || ||||| ||
Sbjct 880326 GCGTCCCGCTGCCAGTTGTCTGCCAGCAAAGCTCAGTCTTTGCTGAACAGGAGGAATTCC 880385
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTG--AGGTTTCCACGTCT 225669
|||||| | |||||||| ||| || ||| || ||| | ||| ||| || ||
Sbjct 880386 TTCCTTAACCTGGATCTTGACCTTTCCATTTTC--TGTTGTACGCAAGGGTTCAACCTCG 880443
Query 225670 AACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
| || || || || || || | ||||| ||||| | |||||| ||
Sbjct 880444 AGAGTAATGGTTTTTCCAGTAAGGGTTTTCATGAAAATTTGCATCTT 880490
>seq188
Length=3041327
Score = 91.5 bits (100), Expect = 4e-13
Identities = 156/225 (69%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|| |||||||| ||||| || ||| |||| || ||| | | ||||| | |||||
Sbjct 1142742 ACAAAGTCTCAACACAAGATGAAGAATGGACTCCTTTGGAATGTTGTAGTA----AAAGT 1142797
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||| |||| || | |||| ||| || | ||| ||| || | || ||||| ||
Sbjct 1142798 GCATCCAGCTTCCAGTTACTTC--AGCAAACCTCAGTATTTGCTGAGCAGGAGGAATCCC 1142855
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || ||||||| ||| ||| ||| || || ||||||||||| | || |
Sbjct 1142856 TTCCTTATCCCGGATCTTGGCCTTTACATGTTCTATTGTATCTGAGGTTTCAGCCTCGAG 1142915
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || || |||| ||||| | ||| | ||||| ||
Sbjct 1142916 GGTGATGGTTTTCCCAGTCAGGGTTTTCACGAAAATCTGCATCTT 1142960
>seq187
Length=3141509
Score = 89.7 bits (98), Expect = 1e-12
Identities = 81/102 (79%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 4477 TGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCTGCTTGT 4536
|| |||||||| ||||| || ||||| || || || |||||||| |||||||| |||||
Sbjct 261835 TGTCCATCAGTGATAGAAATGACATTGGTTGGAATGTAAGCAGACACATCACCAGCTTGA 261894
Query 4537 GTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578
||||| | || ||||| || || | || ||||||||||||
Sbjct 261895 GTTTCTATGACTGGTAACGCAGTCAAAGAGCCACCACCAAAA 261936
>seq298
Length=2265018
Score = 87.8 bits (96), Expect = 4e-12
Identities = 136/191 (71%), Gaps = 5/191 (3%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| |||||||| ||||| |||| ||| || || | | ||| | |||||
Sbjct 584614 AGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTCTAGTCAG--AGAGTGCGGCCATCC 584671
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| || || | || || || || || ||||| || || || || |||||||||
Sbjct 584672 TCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCT 584731
Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|||| ||| || || ||| || || ||||| || || || || ||||| ||
Sbjct 584732 TGGA--TTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCAGGTGTGATGGT 584789
Query 225681 CTTGCCCGTCA 225691
|||||||||||
Sbjct 584790 CTTGCCCGTCA 584800
>seq489
Length=1366292
Score = 86.0 bits (94), Expect = 1e-11
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 4477 TGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCTGCTTGT 4536
|| |||||||| ||||| || ||||| || || || |||||||| |||||||| ||||
Sbjct 650402 TGTCCATCAGTGATAGAAATGACATTGGTTGGAATGTAAGCAGACACATCACCAGCTTCA 650343
Query 4537 GTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578
||||| | || ||||| || || | || ||||||||||||
Sbjct 650342 GTTTCTATCACTGGTAAAGCGGTCAAAGAGCCACCACCAAAA 650301
>seq172
Length=3468991
Score = 84.2 bits (92), Expect = 5e-11
Identities = 84/109 (77%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||| | |||||| || || || |||||||| || || |||||||||||||||||
Sbjct 1110427 GAAGATTTGTCTATCAGTGATGGAAATGACATTTGTTGGAATGTAAGCAGAAACATCACC 1110486
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578
|||||||| || | || ||| | || || | || || ||||||||
Sbjct 1110487 AGCTTGTGTGTCTAGGACTGGTGAAGCAGTCAAGGAGCCGTCACCAAAA 1110535
>seq73
Length=4601553
Score = 84.2 bits (92), Expect = 5e-11
Identities = 137/192 (71%), Gaps = 8/192 (4%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| |||||||| ||||| |||| |||||| | | | ||| |||||
Sbjct 4090085 AGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTGTAGGCTGAGAGAGT----CCATCC 4090030
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| || ||| | || || || | | ||||| || || || || |||||||||
Sbjct 4090029 TCCAGCTGTTTGCCAACAAAAATCAGATGCAGCTGGTCAGGTGGGATGCCCTCCTTGTCT 4089970
Query 225622 TGGATCTTTTGC-TTCACA-GCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCG 225679
||||| ||| || || ||| ||| | | ||||| || || || || | ||||| |
Sbjct 4089969 TGGAT-TTTAGCTTTGACATTCTTAG-TAGTGTCACTGGGCTCGACCTCGAGTGTGATGG 4089912
Query 225680 TCTTGCCCGTCA 225691
||||||||||||
Sbjct 4089911 TCTTGCCCGTCA 4089900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192415520374274
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