Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq612 140 3e-28
seq94 96.9 3e-15
seq183 87.8 1e-12
>seq612
Length=937308
Score = 140 bits (154), Expect = 3e-28
Identities = 370/568 (65%), Gaps = 5/568 (1%)
Strand=Plus/Plus
Query 29666 AGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACG 29725
||||| | ||| ||||||| || ||||| || || | || | | || | ||||
Sbjct 700497 AGGTAAATGTGTGCATCTCTCAAAGTGTGTACCAAGTTACCTTGCTTCAGGTCCGTGATA 700556
Query 29726 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCC 29785
| || | || ||| ||||| || ||||||||||| ||||| || ||||| | || |||
Sbjct 700557 AGTGCAACCACGTAGGTGAGCAGGGAGTAGCTGGCAATGTTGAATGGCACACATAGGCCC 700616
Query 29786 ATGTCCCCTGACCTCTGGTAGAGCT--GGCACGAGAGCTCTCCGTCGCTCACGTAAAACT 29843
| ||| ||||||||| | || | | ||| | ||||| | || |||||| ||||
Sbjct 700617 ACGTCGGCTGACCTCTAGAAGGGTTTCTTCACAACAGCTCACTGTTCACCACGTAGAACT 700676
Query 29844 GACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCAGGCAC 29903
| || | |||||||||| ||||||| |||||||| | ||||| || || || || |
Sbjct 700677 GGCAAAGGGCATGGCACAGAGGAAGTTCCATGAGAAAAAGATCTTTTGGATTTCAAGCGC 700736
Query 29904 ACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCT 29963
||| | |||| | ||||| || |||||| | |||| ||| | |||||||| |
Sbjct 700737 ACAGGGTGATTCCTCTGTCATCAGGGTTGGTTTTGATAGTGTCAGTCACCTTTTGCAGTT 700796
Query 29964 GATCCACCCCCATCCCCGAGTAGTCTGNNNNNNNNNNNNNNNNNNNNNNNNCGAAATGCC 30023
| || || || || | || |||| | ||| |||
Sbjct 700797 GGTCTACTCCTTGACCTGCATAATCTGAATCCATTTCTTTGTATTCTGTCCC-AAAAGCC 700855
Query 30024 TCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCT 30083
||||||| || || || || || || | || || ||||| ||| | | | ||
Sbjct 700856 TCCACTGAAAGCCATAAACTGGGCCTACATCCCCTTCTTCTCTGCAGGAGCATCGCCGGC 700915
Query 30084 TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCT 30143
| | | | |||||| ||| | |||||| | |||||| | || ||||| | || |
Sbjct 700916 TATAC-AGAAGTCTGGGGACCTGTTGGCATGCCAGATTCTCACTCCCTTGGACCACAGGT 700974
Query 30144 CTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAA 30203
|||| | ||||||| || ||| ||||||| || |||||||| || ||||||| |
Sbjct 700975 CTTTAGCACTTGTGGATCCCTTGATAAACCACAACAACTCCTCCAAAACAACCTTCCAGA 701034
Query 30204 AGACCCTCTTGGTCGTGAGGAGGGGAAA 30231
| || | | ||| || | ||| |||||
Sbjct 701035 ATACACATTGGGTTGTCA-GAGAGGAAA 701061
>seq94
Length=4258012
Score = 96.9 bits (106), Expect = 3e-15
Identities = 163/230 (71%), Gaps = 11/230 (5%)
Strand=Plus/Plus
Query 114278 GGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTT 114337
|| || || || || || ||||| |||| || | |||||| | | ||||| ||||||
Sbjct 3581806 GGTTCCTTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTTTAAAGGTCGATTCTTC 3581865
Query 114338 TCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACC-TCTGTC 114396
||||| ||||||||||| ||||| |||||||| || |||| ||||| ||||| ||||
Sbjct 3581866 TCGGGAATGGAGAACCAGGTCTTCCTACCCATAATTACCAAATTCTGTTTACCTTCTGCT 3581925
Query 114397 GGA-AGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCAAAGTCTCACCGGAT 114455
| | ||| || | ||| | | | || ||||| || || || || | |||
Sbjct 3581926 GAAGAGAGGTTGTGGTAATTCTTTGGAAATGTTTGAATTCATT------CCTGAGCGGGG 3581979
Query 114456 GCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCT-GGACACGCTG 114503
||| | ||| |||||||| || | ||| | |||| ||| ||||||| ||
Sbjct 3581980 TCCAGGTCAG-TCTCCGTTCTTGCTGATCCTCATGTTCTGGGACACGGTG 3582028
>seq183
Length=3056380
Score = 87.8 bits (96), Expect = 1e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343
|| || || || ||||| |||| || | |||||| | | ||| | |||||| || ||
Sbjct 88616 TTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTTTAAAGGCCGATTCTTCTCAGGA 88675
Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
||||||||||| ||||| |||||||| ||||||| ||||| ||||||
Sbjct 88676 ATGGAGAACCAGGTCTTCCTACCCATAATCACCAAATTCTGTTTACCT 88723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406125722686906
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |