Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq927 325 3e-84 seq1 114 1e-20 seq156 105 6e-18 seq145 95.1 1e-14 seq138 95.1 1e-14 seq861 86.0 5e-12 >seq927 Length=612318 Score = 325 bits (360), Expect = 3e-84 Identities = 604/877 (69%), Gaps = 17/877 (2%) Strand=Plus/Plus Query 4271 TACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAA 4330 ||||| ||| || ||||| ||||| || ||||| | |||||||| ||||| || ||||| Sbjct 153637 TACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTCCATGAAGTCAAA 153696 Query 4331 CGGATTAGTTGCGTTGTAA-TGTTTTTCACACTTTAGAGCTACA--AGCAATCGGTCAGC 4387 || || | | || || | || | | || |||| || | | || ||| || Sbjct 153697 TGGGTTTTCTACTCTGAAAATCTTGCTAAAACCC---AGCTCCAGCATAAGTCTGTCTGC 153753 Query 4388 TACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTCACAGGTAG 4447 |||||||| || |||| |||| | ||| || || ||||| | |||| || | Sbjct 153754 CACAAATTCAATGCACTGCTTCATTAAAGTGCAATTCATCCCAATGAGCTTCACCGGCAA 153813 Query 4448 CGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTT 4507 || | ||| | ||||| |||||||| |||| || | ||||| ||||| | ||| Sbjct 153814 TGCCTCTGTGAGGAACTCCTGTTCTATCCTTACAGCATTGACAATTATTTCTTTGACTTT 153873 Query 4508 ATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAA 4567 | | || ||||| | || | || | |||| | || ||||| ||||| || || Sbjct 153874 CTGCTCCGAAGGTTTGTGTATCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAA 153933 Query 4568 ACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTT 4627 ||| || ||||||||||| |||||||| ||||| || | || | ||| | |||| || Sbjct 153934 ACCCTCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCAGACATCAGTCCTCATTT 153993 Query 4628 TTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAA 4687 || ||||| ||||| | ||||| || ||||||||||| || ||||| || |||||||| Sbjct 153994 CTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCGGCAAA 154053 Query 4688 CGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGT 4746 ||||| | || || | | ||| ||||||| |||||| || ||||| | Sbjct 154054 AGCTACAACACGTTCTCCATAGGTAGC-CTCTTTGTCCCCAATCCAACGCAAGGCCCAAT 154112 Query 4747 TAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATA---ATTTACTTTTTT 4803 || || ||||| || || || ||||| | || ||||| || | | | |||| | Sbjct 154113 CTGCCTTCTTCTTGACACAAGGCATTGTCTCAATGGCGTTGAAGAGACACTCCCTTTCCT 154172 Query 4804 CAAATGG-GTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTT 4862 ||| |||| |||||| ||||| | || || |||||||| ||||||||| | || Sbjct 154173 ----TGGAATCTTTAATATACGTGTCATTGAGGAGACTATACATCTCAGAATGT-TTGTT 154227 Query 4863 TCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAA 4922 || || ||||| || || || || || || | |||||||| | |||| ||| | | | Sbjct 154228 TCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAATTTCTTGGCTA 154287 Query 4923 AATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACA 4982 || | || || |||||||| || ||||| || ||||| || ||||| || || | |||| Sbjct 154288 AACCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCAGCAAAGAAAGCAAGAACA 154347 Query 4983 TGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTT 5042 || |||||||| || || |||||||| || || |||||| | | || || | Sbjct 154348 TGGGATATAAAATATCTCTCATCAGGCTTCAGGGCTTCCCAGTGCTGGAGGTCCTTGGAG 154407 Query 5043 AAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATA 5102 | ||| ||||| ||| | |||||||| || || |||||||| || ||||| ||||||| Sbjct 154408 AGATCCACTTCCTCAGCTGTCCAAAAGGAAGCCTCCGCTTTCTTATACATCTGCCAAATA 154467 Query 5103 TCAGGATACTGAATCGGAAGTATGACAAATCTGTTGT 5139 ||| | || | || |||| | |||||| | || || Sbjct 154468 TCATGGTATTCGATAGGAAAGACGACAAAGCAGTAGT 154504 >seq1 Length=12387654 Score = 114 bits (126), Expect = 1e-20 Identities = 208/299 (70%), Gaps = 8/299 (3%) Strand=Plus/Plus Query 31770 TAGTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTA 31829 |||| |||||||| ||||| || || | ||||| |||||||| ||| || ||| ||| Sbjct 7595281 TAGTGAAAACCGACATTCAGATGGCTCTTCCTTCTGGGTGCTATGGAAGAGTAGTTCCAT 7595340 Query 31830 GATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACT 31889 | ||||| ||||| | ||| | || || || | || || ||||| |||||| ||| | Sbjct 7595341 GTTCTGGCTTGGCTGCAAAATATTTCATTGATATAGGAGCTGGTGTCATAGATGAAGATT 7595400 Query 31890 ATAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAAATCATACAGTATAA 31946 | |||||||| |||| |||| ||||||||||||| |||||| | | || | | Sbjct 7595401 ACAGAGGAAATATTGGTGTTGTACTGTTTAATTTTGGCAAAGAAAAGT-TTGAAG--TCA 7595457 Query 31947 AAAAGGGCGATAGGGTAGCTCAACTAATTTGCGAAAAAATAGAAATGCCCCAAATAGAAG 32006 ||||||| || | | || || || ||||| ||| || || ||||||| | Sbjct 7595458 AAAAGGGTGACCGAATTGCACAGCTCATTTGTGAACGGATTTTTTATCCTGAAATAGAGG 7595517 Query 32007 TAG-CTAATTATCTAGATTGCACGAAAAGAGGCGCTAAAGGCTTTGGATCTACCGGAAA 32064 || |||| | | ||||| ||| ||||| || | ||| ||||| || || ||||| Sbjct 7595518 AAGTCTAAGT-TTTAGATGACACTAAAAGGGGTTCAGGAGGTTTTGGTTCCACTGGAAA 7595575 >seq156 Length=3029033 Score = 105 bits (116), Expect = 6e-18 Identities = 209/304 (69%), Gaps = 8/304 (3%) Strand=Plus/Minus Query 31776 AAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAGATCTG 31835 |||| || ||||| || | | ||||| |||||| ||| | || ||||||| ||||| Sbjct 19226 AAACTGACATTCAGATAGCCCTCCCTTCTGGGTGCCACGAAAGAGTAGCTCCGC-ATCTG 19168 Query 31836 GATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTATAGAG 31895 | ||||| | ||||| || || || || || | ||||| |||||| ||| ||||||| Sbjct 19167 GCTTGGCTGCAAAACATTTCATAGATGTAGGAGTTGGTGTCATAGATGAAGATTATAGAG 19108 Query 31896 GAAACGTTGGAATTGTGTTGTTTAATTTTGGAGA-AAAATCATACAGTATAAAAAAGGGC 31954 |||| |||| |||| |||||||||| | | | |||| | || | |||||||| Sbjct 19107 GAAATATTGGTGTTGTACTGTTTAATTTGGCAAAGAAAAGTTTGAAG--TCAAAAAGGGT 19050 Query 31955 GATAGGGTAGCTCAACTAATTTGCGAAAAAATAGAAATGCCCCAAATAGAAGTAGCTAAT 32014 || | | || || || ||||| ||| | || || || ||||||| | || | | Sbjct 19049 GACCGAATTGCACAGCTCATTTGTGAACAGATTTTTAT-CCAGAAATAGAGGAAGTTCAA 18991 Query 32015 TATCTAGATTGCACGAAAAGAGGCGCTAAAGGCTTTGGATCTACCGGA---AATTAATTT 32071 | ||||| ||| |||| ||| | ||| ||||| || || ||| |||||| | Sbjct 18990 GTTTTAGATGACACTGAAAGGGGCTCAGGAGGTTTTGGTTCCACTGGAAAGAATTAAAAT 18931 Query 32072 TTGT 32075 |||| Sbjct 18930 TTGT 18927 >seq145 Length=3283612 Score = 95.1 bits (104), Expect = 1e-14 Identities = 113/153 (74%), Gaps = 3/153 (2%) Strand=Plus/Plus Query 31772 GTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAGA 31831 || |||||| || |||| || || | |||| ||||| |||||| ||||||| | | Sbjct 524999 GTGAAAACCTATGTTCAGATAGCTCTGTCTTCTGGGTGTTACGGAAGAATAGCACATC-- 525056 Query 31832 TCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTAT 31891 |||| ||||| | ||||||||||| || | || || ||||| ||| || ||| || Sbjct 525057 -CTGGCTTGGCTGCAAAACACTTTATAGATGCAGGAGCTGGTGTCATAAATGAAGATTAC 525115 Query 31892 AGAGGAAACGTTGGAATTGTGTTGTTTAATTTT 31924 ||||||||| ||| ||||| |||| |||||| Sbjct 525116 AGAGGAAACCCTGGTTTTGTGGTGTTCAATTTT 525148 >seq138 Length=3455650 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 || ||||||||||| |||||||| ||||| || | || ||||| | |||| || || Sbjct 2542792 TCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 2542851 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 ||||| ||||| | ||||| || || |||||||| || ||||| || |||||||| || Sbjct 2542852 AGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCCACTGCGGCAAAAGCC 2542911 Query 4692 AC 4693 || Sbjct 2542912 AC 2542913 Score = 93.3 bits (102), Expect = 4e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 4812 TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCA 4871 |||| |||||||||||| || || || |||||||| ||||||||||| ||||| || ||| Sbjct 2544462 TCTTTAATATAAGTGTCAATGAGGAGACTATACATCTCAGAATGTATGTTTTCCATGGCA 2544521 Query 4872 ATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTC 4915 || || || || || ||||| | |||||||| | |||| ||| Sbjct 2544522 ATTTGGAAGCCATAGAAGCAGCGGGCTTCTGTAATCTGAATTTC 2544565 >seq861 Length=819057 Score = 86.0 bits (94), Expect = 5e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319 || || || || ||||| || || |||||||| ||||| |||||||| ||||| |||||| Sbjct 784457 TGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTTCC 784398 Query 4320 ATAAAATCAAACGGATT 4336 ||||||||||| ||||| Sbjct 784397 ATAAAATCAAAGGGATT 784381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427010195466143