Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq927 325 3e-84
seq1 114 1e-20
seq156 105 6e-18
seq145 95.1 1e-14
seq138 95.1 1e-14
seq861 86.0 5e-12
>seq927
Length=612318
Score = 325 bits (360), Expect = 3e-84
Identities = 604/877 (69%), Gaps = 17/877 (2%)
Strand=Plus/Plus
Query 4271 TACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAA 4330
||||| ||| || ||||| ||||| || ||||| | |||||||| ||||| || |||||
Sbjct 153637 TACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTCCATGAAGTCAAA 153696
Query 4331 CGGATTAGTTGCGTTGTAA-TGTTTTTCACACTTTAGAGCTACA--AGCAATCGGTCAGC 4387
|| || | | || || | || | | || |||| || | | || ||| ||
Sbjct 153697 TGGGTTTTCTACTCTGAAAATCTTGCTAAAACCC---AGCTCCAGCATAAGTCTGTCTGC 153753
Query 4388 TACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTCACAGGTAG 4447
|||||||| || |||| |||| | ||| || || ||||| | |||| || |
Sbjct 153754 CACAAATTCAATGCACTGCTTCATTAAAGTGCAATTCATCCCAATGAGCTTCACCGGCAA 153813
Query 4448 CGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTT 4507
|| | ||| | ||||| |||||||| |||| || | ||||| ||||| | |||
Sbjct 153814 TGCCTCTGTGAGGAACTCCTGTTCTATCCTTACAGCATTGACAATTATTTCTTTGACTTT 153873
Query 4508 ATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAA 4567
| | || ||||| | || | || | |||| | || ||||| ||||| || ||
Sbjct 153874 CTGCTCCGAAGGTTTGTGTATCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAA 153933
Query 4568 ACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTT 4627
||| || ||||||||||| |||||||| ||||| || | || | ||| | |||| ||
Sbjct 153934 ACCCTCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCAGACATCAGTCCTCATTT 153993
Query 4628 TTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAA 4687
|| ||||| ||||| | ||||| || ||||||||||| || ||||| || ||||||||
Sbjct 153994 CTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCGGCAAA 154053
Query 4688 CGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGT 4746
||||| | || || | | ||| ||||||| |||||| || ||||| |
Sbjct 154054 AGCTACAACACGTTCTCCATAGGTAGC-CTCTTTGTCCCCAATCCAACGCAAGGCCCAAT 154112
Query 4747 TAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATA---ATTTACTTTTTT 4803
|| || ||||| || || || ||||| | || ||||| || | | | |||| |
Sbjct 154113 CTGCCTTCTTCTTGACACAAGGCATTGTCTCAATGGCGTTGAAGAGACACTCCCTTTCCT 154172
Query 4804 CAAATGG-GTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTT 4862
||| |||| |||||| ||||| | || || |||||||| ||||||||| | ||
Sbjct 154173 ----TGGAATCTTTAATATACGTGTCATTGAGGAGACTATACATCTCAGAATGT-TTGTT 154227
Query 4863 TCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAA 4922
|| || ||||| || || || || || || | |||||||| | |||| ||| | | |
Sbjct 154228 TCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAATTTCTTGGCTA 154287
Query 4923 AATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACA 4982
|| | || || |||||||| || ||||| || ||||| || ||||| || || | ||||
Sbjct 154288 AACCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCAGCAAAGAAAGCAAGAACA 154347
Query 4983 TGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTT 5042
|| |||||||| || || |||||||| || || |||||| | | || || |
Sbjct 154348 TGGGATATAAAATATCTCTCATCAGGCTTCAGGGCTTCCCAGTGCTGGAGGTCCTTGGAG 154407
Query 5043 AAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATA 5102
| ||| ||||| ||| | |||||||| || || |||||||| || ||||| |||||||
Sbjct 154408 AGATCCACTTCCTCAGCTGTCCAAAAGGAAGCCTCCGCTTTCTTATACATCTGCCAAATA 154467
Query 5103 TCAGGATACTGAATCGGAAGTATGACAAATCTGTTGT 5139
||| | || | || |||| | |||||| | || ||
Sbjct 154468 TCATGGTATTCGATAGGAAAGACGACAAAGCAGTAGT 154504
>seq1
Length=12387654
Score = 114 bits (126), Expect = 1e-20
Identities = 208/299 (70%), Gaps = 8/299 (3%)
Strand=Plus/Plus
Query 31770 TAGTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTA 31829
|||| |||||||| ||||| || || | ||||| |||||||| ||| || ||| |||
Sbjct 7595281 TAGTGAAAACCGACATTCAGATGGCTCTTCCTTCTGGGTGCTATGGAAGAGTAGTTCCAT 7595340
Query 31830 GATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACT 31889
| ||||| ||||| | ||| | || || || | || || ||||| |||||| ||| |
Sbjct 7595341 GTTCTGGCTTGGCTGCAAAATATTTCATTGATATAGGAGCTGGTGTCATAGATGAAGATT 7595400
Query 31890 ATAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAAATCATACAGTATAA 31946
| |||||||| |||| |||| ||||||||||||| |||||| | | || | |
Sbjct 7595401 ACAGAGGAAATATTGGTGTTGTACTGTTTAATTTTGGCAAAGAAAAGT-TTGAAG--TCA 7595457
Query 31947 AAAAGGGCGATAGGGTAGCTCAACTAATTTGCGAAAAAATAGAAATGCCCCAAATAGAAG 32006
||||||| || | | || || || ||||| ||| || || ||||||| |
Sbjct 7595458 AAAAGGGTGACCGAATTGCACAGCTCATTTGTGAACGGATTTTTTATCCTGAAATAGAGG 7595517
Query 32007 TAG-CTAATTATCTAGATTGCACGAAAAGAGGCGCTAAAGGCTTTGGATCTACCGGAAA 32064
|| |||| | | ||||| ||| ||||| || | ||| ||||| || || |||||
Sbjct 7595518 AAGTCTAAGT-TTTAGATGACACTAAAAGGGGTTCAGGAGGTTTTGGTTCCACTGGAAA 7595575
>seq156
Length=3029033
Score = 105 bits (116), Expect = 6e-18
Identities = 209/304 (69%), Gaps = 8/304 (3%)
Strand=Plus/Minus
Query 31776 AAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAGATCTG 31835
|||| || ||||| || | | ||||| |||||| ||| | || ||||||| |||||
Sbjct 19226 AAACTGACATTCAGATAGCCCTCCCTTCTGGGTGCCACGAAAGAGTAGCTCCGC-ATCTG 19168
Query 31836 GATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTATAGAG 31895
| ||||| | ||||| || || || || || | ||||| |||||| ||| |||||||
Sbjct 19167 GCTTGGCTGCAAAACATTTCATAGATGTAGGAGTTGGTGTCATAGATGAAGATTATAGAG 19108
Query 31896 GAAACGTTGGAATTGTGTTGTTTAATTTTGGAGA-AAAATCATACAGTATAAAAAAGGGC 31954
|||| |||| |||| |||||||||| | | | |||| | || | ||||||||
Sbjct 19107 GAAATATTGGTGTTGTACTGTTTAATTTGGCAAAGAAAAGTTTGAAG--TCAAAAAGGGT 19050
Query 31955 GATAGGGTAGCTCAACTAATTTGCGAAAAAATAGAAATGCCCCAAATAGAAGTAGCTAAT 32014
|| | | || || || ||||| ||| | || || || ||||||| | || | |
Sbjct 19049 GACCGAATTGCACAGCTCATTTGTGAACAGATTTTTAT-CCAGAAATAGAGGAAGTTCAA 18991
Query 32015 TATCTAGATTGCACGAAAAGAGGCGCTAAAGGCTTTGGATCTACCGGA---AATTAATTT 32071
| ||||| ||| |||| ||| | ||| ||||| || || ||| |||||| |
Sbjct 18990 GTTTTAGATGACACTGAAAGGGGCTCAGGAGGTTTTGGTTCCACTGGAAAGAATTAAAAT 18931
Query 32072 TTGT 32075
||||
Sbjct 18930 TTGT 18927
>seq145
Length=3283612
Score = 95.1 bits (104), Expect = 1e-14
Identities = 113/153 (74%), Gaps = 3/153 (2%)
Strand=Plus/Plus
Query 31772 GTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAGA 31831
|| |||||| || |||| || || | |||| ||||| |||||| ||||||| | |
Sbjct 524999 GTGAAAACCTATGTTCAGATAGCTCTGTCTTCTGGGTGTTACGGAAGAATAGCACATC-- 525056
Query 31832 TCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTAT 31891
|||| ||||| | ||||||||||| || | || || ||||| ||| || ||| ||
Sbjct 525057 -CTGGCTTGGCTGCAAAACACTTTATAGATGCAGGAGCTGGTGTCATAAATGAAGATTAC 525115
Query 31892 AGAGGAAACGTTGGAATTGTGTTGTTTAATTTT 31924
||||||||| ||| ||||| |||| ||||||
Sbjct 525116 AGAGGAAACCCTGGTTTTGTGGTGTTCAATTTT 525148
>seq138
Length=3455650
Score = 95.1 bits (104), Expect = 1e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
|| ||||||||||| |||||||| ||||| || | || ||||| | |||| || ||
Sbjct 2542792 TCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 2542851
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
||||| ||||| | ||||| || || |||||||| || ||||| || |||||||| ||
Sbjct 2542852 AGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCCACTGCGGCAAAAGCC 2542911
Query 4692 AC 4693
||
Sbjct 2542912 AC 2542913
Score = 93.3 bits (102), Expect = 4e-14
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 4812 TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCA 4871
|||| |||||||||||| || || || |||||||| ||||||||||| ||||| || |||
Sbjct 2544462 TCTTTAATATAAGTGTCAATGAGGAGACTATACATCTCAGAATGTATGTTTTCCATGGCA 2544521
Query 4872 ATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTC 4915
|| || || || || ||||| | |||||||| | |||| |||
Sbjct 2544522 ATTTGGAAGCCATAGAAGCAGCGGGCTTCTGTAATCTGAATTTC 2544565
>seq861
Length=819057
Score = 86.0 bits (94), Expect = 5e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319
|| || || || ||||| || || |||||||| ||||| |||||||| ||||| ||||||
Sbjct 784457 TGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTTCC 784398
Query 4320 ATAAAATCAAACGGATT 4336
||||||||||| |||||
Sbjct 784397 ATAAAATCAAAGGGATT 784381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427010195466143
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |