Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq612 158 9e-34
>seq612
Length=937308
Score = 158 bits (174), Expect = 9e-34
Identities = 396/597 (66%), Gaps = 5/597 (1%)
Strand=Plus/Plus
Query 27131 GCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGA 27190
|||| | ||||| || || | | || |||||| | ||| || |||| || ||||| |
Sbjct 700468 GCTGCATTTTCAGTGGCTCAATGCAATTCAGGTAAATGTGTGCATCTCTCAAAGTGTGTA 700527
Query 27191 CAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGC 27250
| || | || | | || | |||| | || | || ||| ||||| || |||||||
Sbjct 700528 CCAAGTTACCTTGCTTCAGGTCCGTGATAAGTGCAACCACGTAGGTGAGCAGGGAGTAGC 700587
Query 27251 TGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCT--GACA 27308
|||| ||||| || || || | || |||| ||| | ||||||| | || | | ||
Sbjct 700588 TGGCAATGTTGAATGGCACACATAGGCCCACGTCGGCTGACCTCTAGAAGGGTTTCTTCA 700647
Query 27309 CGAGAGCTCTCCATCGCTTACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCAT 27368
| | ||||| | | ||||| ||||| || | ||| |||||| ||||||| ||||
Sbjct 700648 CAACAGCTCACTGTTCACCACGTAGAACTGGCAAAGGGCATGGCACAGAGGAAGTTCCAT 700707
Query 27369 GAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTT 27428
||| | ||||| || || || ||||||| | |||| | ||||| || |||||| |
Sbjct 700708 GAGAAAAAGATCTTTTGGATTTCAAGCGCACAGGGTGATTCCTCTGTCATCAGGGTTGGT 700767
Query 27429 CCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCT 27488
|||| ||| | |||||||| || || || || || | || |||
Sbjct 700768 TTTGATAGTGTCAGTCACCTTTTGCAGTTGGTCTACTCCTTGACCTGCATAATCTGAATC 700827
Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548
||| || |||| |||| ||| ||| ||||||| || || || || || || || | ||
Sbjct 700828 CATTTCTTTGTATTCTG-TCCCAAAAGCCTCCACTGAAAGCCATAAACTGGGCCTACATC 700886
Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608
|| ||||| ||| | | | || | | | | |||||| ||| | |||||| |
Sbjct 700887 CCCTTCTTCTCTGCAGGAGCATCGCCGGCTATAC-AGAAGTCTGGGGACCTGTTGGCATG 700945
Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCA 27668
|||||| | || ||||| | || ||||| | ||||||| || ||| |||||
Sbjct 700946 CCAGATTCTCACTCCCTTGGACCACAGGTCTTTAGCACTTGTGGATCCCTTGATAAACCA 701005
Query 27669 CAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 27725
|| || |||||||| || ||||||| || || | | ||| || | ||| |||||
Sbjct 701006 CAACAACTCCTCCAAAACAACCTTCCAGAATACACATTGGGTTGTCA-GAGAGGAAA 701061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369473104993301
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |