Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq612 158 9e-34 >seq612 Length=937308 Score = 158 bits (174), Expect = 9e-34 Identities = 396/597 (66%), Gaps = 5/597 (1%) Strand=Plus/Plus Query 27131 GCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGA 27190 |||| | ||||| || || | | || |||||| | ||| || |||| || ||||| | Sbjct 700468 GCTGCATTTTCAGTGGCTCAATGCAATTCAGGTAAATGTGTGCATCTCTCAAAGTGTGTA 700527 Query 27191 CAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGC 27250 | || | || | | || | |||| | || | || ||| ||||| || ||||||| Sbjct 700528 CCAAGTTACCTTGCTTCAGGTCCGTGATAAGTGCAACCACGTAGGTGAGCAGGGAGTAGC 700587 Query 27251 TGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCT--GACA 27308 |||| ||||| || || || | || |||| ||| | ||||||| | || | | || Sbjct 700588 TGGCAATGTTGAATGGCACACATAGGCCCACGTCGGCTGACCTCTAGAAGGGTTTCTTCA 700647 Query 27309 CGAGAGCTCTCCATCGCTTACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCAT 27368 | | ||||| | | ||||| ||||| || | ||| |||||| ||||||| |||| Sbjct 700648 CAACAGCTCACTGTTCACCACGTAGAACTGGCAAAGGGCATGGCACAGAGGAAGTTCCAT 700707 Query 27369 GAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTT 27428 ||| | ||||| || || || ||||||| | |||| | ||||| || |||||| | Sbjct 700708 GAGAAAAAGATCTTTTGGATTTCAAGCGCACAGGGTGATTCCTCTGTCATCAGGGTTGGT 700767 Query 27429 CCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCT 27488 |||| ||| | |||||||| || || || || || | || ||| Sbjct 700768 TTTGATAGTGTCAGTCACCTTTTGCAGTTGGTCTACTCCTTGACCTGCATAATCTGAATC 700827 Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||| || |||| |||| ||| ||| ||||||| || || || || || || || | || Sbjct 700828 CATTTCTTTGTATTCTG-TCCCAAAAGCCTCCACTGAAAGCCATAAACTGGGCCTACATC 700886 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 || ||||| ||| | | | || | | | | |||||| ||| | |||||| | Sbjct 700887 CCCTTCTTCTCTGCAGGAGCATCGCCGGCTATAC-AGAAGTCTGGGGACCTGTTGGCATG 700945 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCA 27668 |||||| | || ||||| | || ||||| | ||||||| || ||| ||||| Sbjct 700946 CCAGATTCTCACTCCCTTGGACCACAGGTCTTTAGCACTTGTGGATCCCTTGATAAACCA 701005 Query 27669 CAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 27725 || || |||||||| || ||||||| || || | | ||| || | ||| ||||| Sbjct 701006 CAACAACTCCTCCAAAACAACCTTCCAGAATACACATTGGGTTGTCA-GAGAGGAAA 701061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369473104993301