Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq927 441 1e-118
seq636 136 5e-27
seq1 129 8e-25
seq156 116 5e-21
seq138 116 5e-21
>seq927
Length=612318
Score = 441 bits (488), Expect = 1e-118
Identities = 664/940 (71%), Gaps = 8/940 (1%)
Strand=Plus/Plus
Query 47789 GGTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTC 47844
||||| |||| |||||| |||| || | |||| ||| ||| | || ||||| ||||
Sbjct 153558 GGTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTC 153617
Query 47845 CCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATA 47904
| ||| | ||||| || || || | ||||| || || ||||| || ||||||| ||| |
Sbjct 153618 CTATTCTCTGATACTCTCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAA 153677
Query 47905 TATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTG 47964
|||| ||||| || |||||||| || || | | |||| || |||| || | ||
Sbjct 153678 TATTCTCCATGAAGTCAAATGGGTTTTCTACTCTGAAAATCTTGCTAAAACCCAGCTCCA 153737
Query 47965 AAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTA 48024
|| ||||| ||||| || ||||| || | ||||| | |||||||| || |
Sbjct 153738 GCATAAGTCTGTCTGCCACAAATTCAATGCACTGCTTCATTAAAGTGCAATTCATCCCAA 153797
Query 48025 TAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTA 48084
| || || || || | ||||| || || ||||| ||||| || | ||||||| || |
Sbjct 153798 TGAGCTTCACCGGCAATGCCTCTGTGAGGAACTCCTGTTCTATCCTTACAGCATTGACAA 153857
Query 48085 TTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATG 48144
|||| | | || | | ||| ||| | | || ||||| ||||| | || |
Sbjct 153858 TTATTTCTTTGACTTTCTGCTCCGAAGGTTTGTGTATCAGGTGTTTGAACATCAGGCAGG 153917
Query 48145 CAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGG 48204
|||| ||||| || | ||| |||||||| ||||| | |||||| ||||||||||| || |
Sbjct 153918 CAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCAG 153977
Query 48205 GCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGC 48264
||| ||||| | ||| |||||||| ||||| | || ||||| ||||||||||| || |
Sbjct 153978 ACATCAGTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTC 154037
Query 48265 CTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATCC 48321
|||| || || ||||| || || | ||||| || | || || |||| ||||
Sbjct 154038 CTTCCACTGCGGCAAAAGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAATCC 154097
Query 48322 ACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGA 48381
| || |||||||| ||||||||||| |||||||||||||| || || || || ||||
Sbjct 154098 AACGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATTGTCTCAATGGCGTTGAAGA 154157
Query 48382 GAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGG 48441
|| | | |||| ||| |||||||| || || || | | ||||||||||| || |
Sbjct 154158 GACACTCCCTTTCCTTGGAATCTTTAATATACGTGTCATTGAGGAGACTATACATCTCAG 154217
Query 48442 AGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTA 48501
| || | ||| || | || || || || || || ||||| | |||||||| ||||| |
Sbjct 154218 AATGTTTGTTTCCA-TGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAA 154276
Query 48502 CCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAA 48561
|| | ||| || || |||| || ||||| ||||| |||||||| |||||||| |
Sbjct 154277 TTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCAGCAAAGA 154336
Query 48562 ATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGA 48621
| || | ||||| ||||||||| | || | | |||| | ||||| | ||
Sbjct 154337 AAGCAAGAACATGGGATATAAAATATCTCTCATCAGGCTTCAGGGCTTCCCAGTGCTGGA 154396
Query 48622 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACA 48681
|| || || | ||| ||||| |||||||||||||| || ||||| ||||| |||||||
Sbjct 154397 GGTCCTTGGAGAGATCCACTTCCTCAGCTGTCCAAAAGGAAGCCTCCGCTTTCTTATACA 154456
Query 48682 TATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721
| | ||| |||||| ||||| ||| || || | |||||
Sbjct 154457 TCTGCCAAATATCATGGTATTCGATAGGAAAGACGACAAA 154496
>seq636
Length=1077480
Score = 136 bits (150), Expect = 5e-27
Identities = 110/133 (83%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186
||||||||||| ||||| |||||||||||||| || || |||||||||||||| | ||
Sbjct 918550 TGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATATGGTTCAATGGAC 918491
Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246
||||| ||||||| ||| |||||||| |||||||| ||||| || || | | |||||||
Sbjct 918490 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAACTA 918431
Query 77247 TTTCTGAGACCAT 77259
|| || | |||||
Sbjct 918430 TTCCTTATACCAT 918418
Score = 111 bits (122), Expect = 2e-19
Identities = 109/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458
|| || ||||| || | || ||||| ||||| |||||||| | |||||||| || |||
Sbjct 891287 GTACCAGCATTGAAGAGAGTGGGAGAAGCATGGGTAAACCACCTCTCAGAAAGAAGGTTG 891228
Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518
|||||||||||||| | || || || || ||||| || || | ||| | |||||||
Sbjct 891227 TATGTTTCAATAGCAGCATCAATATCTTCTTCGTGAATCCCCACAGATACCCTCATCAAC 891168
Query 78519 ATATGCTGAGGTCTTTCAACC 78539
||||| |||||||||||| ||
Sbjct 891167 ATATGTTGAGGTCTTTCAGCC 891147
Score = 98.7 bits (108), Expect = 1e-15
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062
||||||||||| |||||||| || ||||| || |||| || || || | || | ||
Sbjct 899269 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGC 899210
Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122
||||| |||||||| ||||| || | ||| |||||||| | || || ||||||| |||
Sbjct 899209 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGT 899150
Query 78123 TCTAGATATATTGCCATAACTCCAGGTCG 78151
|| || || || || | | ||||||||
Sbjct 899149 TCCAGGTAAATAGCAAATGCCCCAGGTCG 899121
>seq1
Length=12387654
Score = 129 bits (142), Expect = 8e-25
Identities = 247/359 (69%), Gaps = 19/359 (5%)
Strand=Plus/Minus
Query 45876 TCCAGTGGATCCAAATCCT--TGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCC 45933
||||||||| ||||| ||| ||| | | |||| ||| |||||| | || ||||||
Sbjct 7595573 TCCAGTGGAACCAAAACCTCCTGAAC--CCCTTTTAGTGTCATCTAAAACTTAGACTTCC 7595516
Query 45934 TTCAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTT 45993
| | ||||||||| | || |||| | | || || || || |||| |||||| | ||
Sbjct 7595515 TCTATTTCAGGATAAAAAATCCGTTCACAAATGAGCTGTGCAATTCGGTCACCCTTTTTG 7595456
Query 45994 ATTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCT 46053
| |||||| | ||||| ||| ||| | ||| | || ||||| | ||||| ||||||
Sbjct 7595455 ACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAATATTTCCTCTGTAATCT 7595396
Query 46054 TCATCTATTACTCCCCCTCCCACATC---GATACCTTTTAGAGACAGTCCAGATCTAGGA 46110
|||||||| || || |||| | ||| || | |||| || || ||||| | |||
Sbjct 7595395 TCATCTATGACACCAGCTCCTATATCAATGAAATATTTTGCAGCCAAGCCAGAACATGGA 7595336
Query 46111 GCTATTCTTCCATA----ACAGAATTTGGGCATAGACATCCGAATATCTGTTTTAATCAA 46166
||| ||||||||| ||||| || | || |||| |||| || ||||| | |
Sbjct 7595335 ACTACTCTTCCATAGCACCCAGAA----GGAAGAGCCATCTGAATGTCGGTTTTCACTA- 7595281
Query 46167 TCTCCTTTCTCC--AGGAGGGATAGTATAGTCGTACGCACTGTATAAATCATATCCTGC 46223
| ||||||| ||| || | || || || || |||||||| | ||||| || ||
Sbjct 7595280 -CGATTTTCTCCATAGGTGGTAATGTGTAATCATAGGCACTGTACAGGTCATAGCCCGC 7595223
>seq156
Length=3029033
Score = 116 bits (128), Expect = 5e-21
Identities = 179/249 (72%), Gaps = 10/249 (4%)
Strand=Plus/Plus
Query 45876 TCCAGTGGATCCAAATCCT--TGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCC 45933
||||||||| ||||| ||| ||||| | |||||||| |||||| | ||| ||||||
Sbjct 18943 TCCAGTGGAACCAAAACCTCCTGAGC--CCCTTTCAGTGTCATCTAAAACTTGAACTTCC 19000
Query 45934 TTCAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTT 45993
| | || |||||| | || ||| | | || || || || |||| |||||| | ||
Sbjct 19001 TCTATTTCTGGATAAAA-ATCTGTTCACAAATGAGCTGTGCAATTCGGTCACCCTTTTTG 19059
Query 45994 ATTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCT 46053
| |||||| | ||||| ||| ||| | ||| | || ||||| | ||||||||||||
Sbjct 19060 ACTTCAAACTTTTCTTTGCCAA-ATTAAACAGTACAACACCAATATTTCCTCTATAATCT 19118
Query 46054 TCATCTATTACTCCCCCTCCCACATC---GATACCTTTTAGAGACAGTCCAGATCTAGGA 46110
|||||||| || || |||| ||||| || | |||| || || |||||| |||
Sbjct 19119 TCATCTATGACACCAACTCCTACATCTATGAAATGTTTTGCAGCCAAGCCAGAT-GCGGA 19177
Query 46111 GCTATTCTT 46119
|||| ||||
Sbjct 19178 GCTACTCTT 19186
>seq138
Length=3455650
Score = 116 bits (128), Expect = 5e-21
Identities = 97/119 (82%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224
|||||||| ||||| | |||||| ||||||||||| || ||||| ||||| ||||| |||
Sbjct 2542792 TCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 2542851
Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283
||||| ||||| | || ||||| || |||||||| || ||||| || || ||||| ||
Sbjct 2542852 AGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCCACTGCGGCAAAAGC 2542910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694603058281440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |