Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq927 446 2e-120 seq636 136 6e-27 seq138 116 5e-21 seq1 105 1e-17 seq861 102 1e-16 seq156 86.0 9e-12 >seq927 Length=612318 Score = 446 bits (494), Expect = 2e-120 Identities = 661/934 (71%), Gaps = 7/934 (1%) Strand=Plus/Plus Query 46283 TTTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTT 46339 |||| ||||| |||| || | |||| ||| ||| | | |||||| ||||| ||| Sbjct 153564 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCTATTC 153623 Query 46340 TTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 46399 | || || || ||||| | ||||| || || ||||| || ||||||| ||| ||||| | Sbjct 153624 TCTGATACTCTCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCT 153683 Query 46400 CCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCA 46459 |||| || ||||| || || || | |||| || |||| || | || || | Sbjct 153684 CCATGAAGTCAAATGGGTTTTCTACTCTGAAAATCTTGCTAAAACCCAGCTCCAGCATAA 153743 Query 46460 GTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTT 46519 |||| ||||| || ||||| || || ||||| | |||||||| || ||||| | Sbjct 153744 GTCTGTCTGCCACAAATTCAATGCACTGCTTCATTAAAGTGCAATTCATCCCAATGAGCT 153803 Query 46520 TGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCG 46579 | ||||| | ||||| || || ||||| ||||| || | ||||||| ||||| Sbjct 153804 TCACCGGCAATGCCTCTGTGAGGAACTCCTGTTCTATCCTTACAGCATTGACAATTATTT 153863 Query 46580 ATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAAT 46639 | | ||| | | ||| ||| || |||| ||||| ||||| | || ||||| | Sbjct 153864 CTTTGACTTTCTGCTCCGAAGGTTTGTGTATCAGGTGTTTGAACATCAGGCAGGCAAAGT 153923 Query 46640 CACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTA 46699 |||| || | || |||||||| ||||| | |||||| ||||||||||| |||| ||| | Sbjct 153924 CACAGTGTAAACCCTCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCAGACATCA 153983 Query 46700 GTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTA 46759 |||| | || |||||||| ||||| | || ||||| ||||||||||| || ||||| | Sbjct 153984 GTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCA 154043 Query 46760 CAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG---AATCCACCTTT 46816 | || || || || |||| | ||||| || | || || || | |||||| | Sbjct 154044 CTGCGGCAAAAGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAATCCAACGCA 154103 Query 46817 GAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGt 46876 |||||||| ||||| ||||| |||||||||||||| || || || || |||||| | | Sbjct 154104 AGGCCCAATCTGCCTTCTTCTTGACACAAGGCATTGTCTCAATGGCGTTGAAGAGACACT 154163 Query 46877 ttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAA 46936 |||| | |||||||| ||| || || | | ||||||||||| || ||||| Sbjct 154164 CCCTTTCCTTGGAATCTTTAATATACGTGTCATTGAGGAGACTATACATCTCAGAATGTT 154223 Query 46937 TGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTG 46996 ||||| || | || || || || || || ||||| | ||||| |||||||| | ||| Sbjct 154224 TGTTTCCA-TGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAATTTCTT 154282 Query 46997 TACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCA 47056 | ||| || || ||| || ||||| ||||| |||||||| |||||||| || || | Sbjct 154283 GGCTAAACCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCAGCAAAGAAAGCAA 154342 Query 47057 ATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTT 47116 ||||| ||||||||| | ||||| | |||| | ||||| | || || | Sbjct 154343 GAACATGGGATATAAAATATCTCTCATCAGGCTTCAGGGCTTCCCAGTGCTGGAGGTCCT 154402 Query 47117 TTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCC 47176 | || | ||| ||||| ||||||||||| || || ||||| ||||| |||||||| | || Sbjct 154403 TGGAGAGATCCACTTCCTCAGCTGTCCAAAAGGAAGCCTCCGCTTTCTTATACATCTGCC 154462 Query 47177 ATATATCACGATATTGGATCGGAAAAATAACAAA 47210 | |||||| | |||| ||| ||||| | ||||| Sbjct 154463 AAATATCATGGTATTCGATAGGAAAGACGACAAA 154496 >seq636 Length=1077480 Score = 136 bits (150), Expect = 6e-27 Identities = 110/133 (83%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 ||||||||||| ||||| ||||| |||||||| || || |||||||||||||| | || Sbjct 918550 TGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATATGGTTCAATGGAC 918491 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| ||||||| ||| ||||||||||||||||| ||||| || || | | ||||||| Sbjct 918490 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAACTA 918431 Query 75842 TTTCTGAGACCAT 75854 || || | ||||| Sbjct 918430 TTCCTTATACCAT 918418 Score = 114 bits (126), Expect = 2e-20 Identities = 125/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398 || || | ||| |||||||| ||||| | || || || || || || || || ||||| Sbjct 886351 CTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGAATG 886292 Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458 ||||||||||| || | ||||| |||| || ||| |||| || || |||||||||| | Sbjct 886291 GCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTAGT 886232 Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504 || | |||||| || || | |||| ||||| || |||||||||| Sbjct 886231 TCCACAGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCATGG 886186 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || ||||| || | || ||||| ||||| || ||||| | |||||||| || ||| Sbjct 891287 GTACCAGCATTGAAGAGAGTGGGAGAAGCATGGGTAAACCACCTCTCAGAAAGAAGGTTG 891228 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 |||||||||||| | || || ||||| || ||||| || |||| || | ||||||| Sbjct 891227 TATGTTTCAATAGCAGCATCAATATCTTCTTCGTGAATCCCCACAGATACCCTCATCAAC 891168 Query 77114 ATATGCTGAGGTCGTTC 77130 ||||| ||||||| ||| Sbjct 891167 ATATGTTGAGGTCTTTC 891151 Score = 91.5 bits (100), Expect = 2e-13 Identities = 119/162 (73%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 75986 GCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATT- 76044 || || || || || || || || || || |||||||| ||||| || || | |||||| Sbjct 906260 GCCAGATCACAGCTGGCTTCCAAGGCTCCATAATAAATGGTTTCAAAGATTTGCTTATTC 906201 Query 76045 AAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAG 76104 || | || | || || |||| ||||||||||| | |||||||| |||||||| || Sbjct 906200 AATAACTGG-GCCTCTGGACTCTCAAAAGGATACCTCATCAGAATAAAAGCATCTGCCAG 906142 Query 76105 TCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 76146 || || |||||||| ||||| || | ||| | ||||| || Sbjct 906141 ACCTTGTACTCCAATTCCAATGGGGCGATGGCGTTTATTTGA 906100 >seq138 Length=3455650 Score = 116 bits (128), Expect = 5e-21 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 |||||||| ||||| | |||||| ||||||||||| |||||||| ||||| || || ||| Sbjct 2542792 TCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 2542851 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 ||||| ||||| | || ||||| || |||||||| || ||||| || || || || || Sbjct 2542852 AGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCCACTGCGGCAAAAGCC 2542911 Query 46774 ACAA 46777 |||| Sbjct 2542912 ACAA 2542915 >seq1 Length=12387654 Score = 105 bits (116), Expect = 1e-17 Identities = 242/359 (67%), Gaps = 19/359 (5%) Strand=Plus/Minus Query 44363 TCCCGTTGATCCAAATCCT--TGAGCGTCTCTATTGGTACTATCTAGAGATTGTACTTCC 44420 ||| || || ||||| ||| ||| | | || || || ||||| | || |||||| Sbjct 7595573 TCCAGTGGAACCAAAACCTCCTGAAC--CCCTTTTAGTGTCATCTAAAACTTAGACTTCC 7595516 Query 44421 TCTAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCTGTATTT 44480 |||| ||||||||| | || |||| | | || || || || |||| ||||| | || Sbjct 7595515 TCTATTTCAGGATAAAAAATCCGTTCACAAATGAGCTGTGCAATTCGGTCACCCTTTTTG 7595456 Query 44481 ATTTTAAAGGTATCTTTTCCATTATTGATCAAAATTACTCCAATGTTCCCCCTATAATCT 44540 | || ||| | ||||| ||| ||| | || | || ||||| || || || |||||| Sbjct 7595455 ACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAATATTTCCTCTGTAATCT 7595396 Query 44541 TCATCTATTACTCCACCTCCCACATCAAT---ACCTTTTAGAGAAAGACCCGATCTAGGC 44597 |||||||| || ||| |||| | |||||| | |||| || | || || | || Sbjct 7595395 TCATCTATGACACCAGCTCCTATATCAATGAAATATTTTGCAGCCAAGCCAGAACATGGA 7595336 Query 44598 GCTATTCTTCCATA----ACAGAATTTTGGCATAGACATACGAATATCTGTTTTAATCAA 44653 ||| ||||||||| ||||| || | || ||| |||| || ||||| | | Sbjct 7595335 ACTACTCTTCCATAGCACCCAGAA----GGAAGAGCCATCTGAATGTCGGTTTTCACTA- 7595281 Query 44654 CCGTCTTTCTCC--AGGAGGGATAGTATAATCGTAAGCACTGTATAAATCATATCCTGC 44710 || ||||||| ||| || | || ||||| || |||||||| | ||||| || || Sbjct 7595280 -CGATTTTCTCCATAGGTGGTAATGTGTAATCATAGGCACTGTACAGGTCATAGCCCGC 7595223 >seq861 Length=819057 Score = 102 bits (112), Expect = 1e-16 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711 |||||||||| || || | ||| || ||||| ||||| |||||||| || || | || | Sbjct 774704 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTTTTCT 774645 Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771 | ||||| |||||||| || |||||||| || ||||| | ||||||||||| || || | Sbjct 774644 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAACTCCTTCTACAGCAGCAAAGG 774585 Query 46772 CGAC 46775 | || Sbjct 774584 CCAC 774581 Score = 93.3 bits (102), Expect = 6e-14 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACG 47186 ||| ||||| ||||||||||| ||||||| ||| | ||||||||| ||||| |||||| | Sbjct 757929 TACCTCTTCTGCTGTCCAGAAGGACGCCTGTGCCTGTTTATACATCTTCCAAATATCAGG 757870 Query 47187 ATATTGGATCGGAAAAATAACAAATC 47212 || ||||| ||||| || ||||||| Sbjct 757869 GTACTGGATTGGAAAGATGACAAATC 757844 >seq156 Length=3029033 Score = 86.0 bits (94), Expect = 9e-12 Identities = 147/209 (70%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 44363 TCCCGTTGATCCAAATCCT--TGAGCGTCTCTATTGGTACTATCTAGAGATTGTACTTCC 44420 ||| || || ||||| ||| ||||| | || | || ||||| | ||| |||||| Sbjct 18943 TCCAGTGGAACCAAAACCTCCTGAGC--CCCTTTCAGTGTCATCTAAAACTTGAACTTCC 19000 Query 44421 TCTAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCTGTATTT 44480 |||| || |||||| | || ||| | | || || || || |||| ||||| | || Sbjct 19001 TCTATTTCTGGATAAAA-ATCTGTTCACAAATGAGCTGTGCAATTCGGTCACCCTTTTTG 19059 Query 44481 ATTTTAAAGGTATCTTTTCCATTATTGATCAAAATTACTCCAATGTTCCCCCTATAATCT 44540 | || ||| | ||||| ||| ||| | || | || ||||| || || ||||||||| Sbjct 19060 ACTTCAAACTTTTCTTTGCCAA-ATTAAACAGTACAACACCAATATTTCCTCTATAATCT 19118 Query 44541 TCATCTATTACTCCACCTCCCACATCAAT 44569 |||||||| || ||| |||| ||||| || Sbjct 19119 TCATCTATGACACCAACTCCTACATCTAT 19147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712866929670720