Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq265 102 2e-16
seq808 91.5 3e-13
seq331 87.8 4e-12
seq45 87.8 4e-12
seq376 86.0 1e-11
seq920 84.2 5e-11
>seq265
Length=2261556
Score = 102 bits (112), Expect = 2e-16
Identities = 155/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | |||||||||||||| ||||| ||||| |||||||| || | ||||| |
Sbjct 841133 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 841074
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || || || || ||||| | || ||||| || | | |||||||||
Sbjct 841073 CCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTCC 841014
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || || ||| | |||| | || || || || || || ||
Sbjct 841013 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTG 840954
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || || || || |||||||| | |||||| ||
Sbjct 840953 ATGGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCATCTT 840913
>seq808
Length=762264
Score = 91.5 bits (100), Expect = 3e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | |||||||||||||| ||||| ||||| |||||||| || | || |
Sbjct 448029 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGATATGT 447970
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || || || || ||||| || || ||||| || | | |||||||||
Sbjct 447969 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCC 447910
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || || ||| | |||| | ||||| || || || || ||
Sbjct 447909 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGGGTG 447850
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || || || |||| ||| | ||||||
Sbjct 447849 ATGGTCTTCCCAGTAAGGGTTTTCATGAAAATCTGCAT 447812
>seq331
Length=2147541
Score = 87.8 bits (96), Expect = 4e-12
Identities = 152/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | |||||||||||||| ||||| ||||| |||||||| || | ||||| |
Sbjct 851459 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 851400
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || || || || ||||| | || ||||| || | | |||||||||
Sbjct 851399 CCATCTTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGGAATTCCTTCC 851340
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || || ||| | |||| | || || || | | || ||
Sbjct 851339 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTTGAGGGTG 851280
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || || | || |||||||| | |||||| ||
Sbjct 851279 ATGGTCTTCCCGGTAAAGGTTTTCACGAAAATCTGCATCTT 851239
>seq45
Length=5545317
Score = 87.8 bits (96), Expect = 4e-12
Identities = 148/210 (70%), Gaps = 7/210 (3%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||| |||||||| ||||| || || || | | ||| ||||| || |
Sbjct 1737692 CAAG-TGCAGAGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGTGACCATCCTCCA 1737750
Query 151957 GGCTTTT--CCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
| || || ||| | || || || ||||||||||| | | ||| || ||||| |||||
Sbjct 1737751 G-CTGTTGGCCCCACAAAAATCAGACTCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTG 1737809
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
||||| ||||||| |||| | |||| | || || || || || || || ||
Sbjct 1737810 GATTTTAGCTTTGACATTCTCAGTGGTGTC---AGGCTTGACCTCGAGTGTGATGGTCTT 1737866
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || || |||||||| || | ||||||
Sbjct 1737867 GCCTGTCAGGGTCTTCACAAAAATCTGCAT 1737896
>seq376
Length=1527771
Score = 86.0 bits (94), Expect = 1e-11
Identities = 148/216 (69%), Gaps = 7/216 (3%)
Strand=Plus/Minus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | |||||||||||||| ||||| ||||| |||||||| || | |||||
Sbjct 1196500 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGT 1196441
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || || || | ||||| || || ||||| || | | |||||||||
Sbjct 1196440 CCATCTTCCAGTTGCTTGCCAGTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCC 1196381
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || ||| ||| | |||| | || || || || || || ||
Sbjct 1196380 TTATCCTGGCCTTT-------ACATTTTCTATTGTATCCGAGGGTTCAACCTCCAGGGTG 1196328
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGC 152102
|| || || || || || ||||||||||| | ||||
Sbjct 1196327 ATGGTCTTCCCAGTAAGGGTCTTCACGAAAATCTGC 1196292
>seq920
Length=534542
Score = 84.2 bits (92), Expect = 5e-11
Identities = 145/211 (69%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
||||||||||||| |||| ||||| |||||||| || | ||||| | |||||||| |
Sbjct 150023 CAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCA 150082
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || || ||||| || || ||||| || | | ||||||||||| | || |
Sbjct 150083 GTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATTCTGGA 150142
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || || ||| | ||| | || || || || | || || || || || |
Sbjct 150143 TCTTGGCCTTTACATTTTCTTTTGTATCCGAGGGTTCAACCTTGAGGGTGATGGTCTTCC 150202
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| || || || |||||||| | |||||| ||
Sbjct 150203 CAGTAAGGGTTTTCACGAAAATCTGCATCTT 150233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153708875416141
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |