Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq927 217 2e-51 seq861 102 8e-17 seq138 102 8e-17 >seq927 Length=612318 Score = 217 bits (240), Expect = 2e-51 Identities = 394/575 (69%), Gaps = 1/575 (0%) Strand=Plus/Plus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || ||||| ||||| |||| || ||||| || ||||| | ||| || |||||||| | Sbjct 153914 CAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGG 153973 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628 || | ||| | ||||| ||| || | ||| ||||| | ||||| || || |||||||| Sbjct 153974 CCAGACATCAGTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAG 154033 Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688 || || || || || ||||| || |||| |||| ||| | || || | | || | Sbjct 154034 ATTCCTTCCACTGCGGCAAAAGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCA 154093 Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748 ||||| | ||||| |||||| || ||||| ||||| ||||| || || Sbjct 154094 ATCCAACGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATTGTCTCAATGGCGTTG 154153 Query 23749 AAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATT 23808 |||||| | |||| | |||| | ||||| || ||| | || | ||||||||| Sbjct 154154 AAGAGACACTCCCTTTCCTTGGAATCTTTAATATACGTGTCATTGAGGAGACTATACATC 154213 Query 23809 TCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAAT 23868 |||||||| | ||| || | ||||| || || ||||| ||||| | ||||| | | Sbjct 154214 TCAGAATGTTTGTTTCCA-TGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATC 154272 Query 23869 TGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCA 23928 |||| || | ||| | | | || ||||| || || || |||||||| |||||| Sbjct 154273 TGAATTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCAGCA 154332 Query 23929 AAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCA 23988 |||||||||||||||| |||||||| ||| ||||||| | || ||| | Sbjct 154333 AAGAAAGCAAGAACATGGGATATAAAATATCTCTCATCAGGCTTCAGGGCTTCCCAGTGC 154392 Query 23989 TTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTA 24048 | | || || || | ||| ||||| ||| |||||||||| ||| || |||| Sbjct 154393 TGGAGGTCCTTGGAGAGATCCACTTCCTCAGCTGTCCAAAAGGAAGCCTCCGCTTTCTTA 154452 Query 24049 TACATTAGCCAAATATCATTATGTTGTATTGGAAA 24083 ||||| |||||||||||| | || || ||||| Sbjct 154453 TACATCTGCCAAATATCATGGTATTCGATAGGAAA 154487 >seq861 Length=819057 Score = 102 bits (112), Expect = 8e-17 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590 ||||||| || || || | |||||| ||||| || | ||| ||||| | |||| ||| | Sbjct 774704 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTTTTCT 774645 Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650 | | ||| ||||| |||||||| ||||| || ||||||| || || ||||| ||||||| Sbjct 774644 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAACTCCTTCTACAGCAGCAAAGG 774585 Query 23651 CCAC 23654 |||| Sbjct 774584 CCAC 774581 >seq138 Length=3455650 Score = 102 bits (112), Expect = 8e-17 Identities = 100/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| || ||||| | ||| || |||||||| | || ||||| | ||||||||| || Sbjct 2542792 TCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 2542851 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | ||| ||||| | ||||| || ||||||||||| || || || || || ||||| ||| Sbjct 2542852 AGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCCACTGCGGCAAAAGCC 2542911 Query 23653 ACAAGACGT 23661 |||| |||| Sbjct 2542912 ACAACACGT 2542920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521438647679400