Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq927 217 2e-51
seq861 102 8e-17
seq138 102 8e-17
>seq927
Length=612318
Score = 217 bits (240), Expect = 2e-51
Identities = 394/575 (69%), Gaps = 1/575 (0%)
Strand=Plus/Plus
Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568
|| ||||| ||||| |||| || ||||| || ||||| | ||| || |||||||| |
Sbjct 153914 CAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGG 153973
Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628
|| | ||| | ||||| ||| || | ||| ||||| | ||||| || || ||||||||
Sbjct 153974 CCAGACATCAGTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAG 154033
Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688
|| || || || || ||||| || |||| |||| ||| | || || | | || |
Sbjct 154034 ATTCCTTCCACTGCGGCAAAAGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCA 154093
Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748
||||| | ||||| |||||| || ||||| ||||| ||||| || ||
Sbjct 154094 ATCCAACGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATTGTCTCAATGGCGTTG 154153
Query 23749 AAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATT 23808
|||||| | |||| | |||| | ||||| || ||| | || | |||||||||
Sbjct 154154 AAGAGACACTCCCTTTCCTTGGAATCTTTAATATACGTGTCATTGAGGAGACTATACATC 154213
Query 23809 TCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAAT 23868
|||||||| | ||| || | ||||| || || ||||| ||||| | ||||| | |
Sbjct 154214 TCAGAATGTTTGTTTCCA-TGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATC 154272
Query 23869 TGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCA 23928
|||| || | ||| | | | || ||||| || || || |||||||| ||||||
Sbjct 154273 TGAATTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCAGCA 154332
Query 23929 AAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCA 23988
|||||||||||||||| |||||||| ||| ||||||| | || ||| |
Sbjct 154333 AAGAAAGCAAGAACATGGGATATAAAATATCTCTCATCAGGCTTCAGGGCTTCCCAGTGC 154392
Query 23989 TTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTA 24048
| | || || || | ||| ||||| ||| |||||||||| ||| || ||||
Sbjct 154393 TGGAGGTCCTTGGAGAGATCCACTTCCTCAGCTGTCCAAAAGGAAGCCTCCGCTTTCTTA 154452
Query 24049 TACATTAGCCAAATATCATTATGTTGTATTGGAAA 24083
||||| |||||||||||| | || || |||||
Sbjct 154453 TACATCTGCCAAATATCATGGTATTCGATAGGAAA 154487
>seq861
Length=819057
Score = 102 bits (112), Expect = 8e-17
Identities = 97/124 (78%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590
||||||| || || || | |||||| ||||| || | ||| ||||| | |||| ||| |
Sbjct 774704 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTTTTCT 774645
Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650
| | ||| ||||| |||||||| ||||| || ||||||| || || ||||| |||||||
Sbjct 774644 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAACTCCTTCTACAGCAGCAAAGG 774585
Query 23651 CCAC 23654
||||
Sbjct 774584 CCAC 774581
>seq138
Length=3455650
Score = 102 bits (112), Expect = 8e-17
Identities = 100/129 (78%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592
||||| || ||||| | ||| || |||||||| | || ||||| | ||||||||| ||
Sbjct 2542792 TCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 2542851
Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652
| ||| ||||| | ||||| || ||||||||||| || || || || || ||||| |||
Sbjct 2542852 AGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCCACTGCGGCAAAAGCC 2542911
Query 23653 ACAAGACGT 23661
|||| ||||
Sbjct 2542912 ACAACACGT 2542920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521438647679400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |