Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq808 118 8e-22
seq265 118 8e-22
seq376 105 5e-18
seq331 105 5e-18
seq5307 95.1 9e-15
seq717 87.8 1e-12
seq298 87.8 1e-12
seq416 84.2 2e-11
>seq808
Length=762264
Score = 118 bits (130), Expect = 8e-22
Identities = 159/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC-GGCGAGTTGGCG 44178
||||||||||| || ||||| ||| ||||||||| |||||||| || | | || | |
Sbjct 448029 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGAT-ATG 447971
Query 44179 CTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTC 44238
| || ||||| ||||| || |||||||||| | |||||||| | ||| | |||||
Sbjct 447970 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTC 447911
Query 44239 CTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGT 44298
||| ||| ||||| ||| | || |||| || || | || ||| ||||| | ||
Sbjct 447910 CTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGGGT 447851
Query 44299 AATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| || || ||||| |||| ||| || |||||
Sbjct 447850 GATGGTCTTCCCAGTAAGGGTTTTCATGAAAATCTGCAT 447812
>seq265
Length=2261556
Score = 118 bits (130), Expect = 8e-22
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||||||||| || ||||| ||| ||||||||| |||||||| || | | ||
Sbjct 841133 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 841074
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||| ||||| || ||||||||| | |||||||| | ||| | ||||||
Sbjct 841073 CCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTCC 841014
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| ||||| ||| | || |||| || || | || ||| ||||| | ||
Sbjct 841013 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTG 840954
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| || || ||||| |||||||| || |||||
Sbjct 840953 ATGGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCAT 840916
>seq376
Length=1527771
Score = 105 bits (116), Expect = 5e-18
Identities = 156/219 (71%), Gaps = 13/219 (6%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGA--GT-TGG 44176
||||||||||| || ||||| ||| ||||||||| |||||||| || | | || ||
Sbjct 1196500 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGT 1196441
Query 44177 CGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCT 44236
| | || ||||| ||||| || | |||||||| | |||||||| | ||| | |||
Sbjct 1196440 C---CATCTTCCAGTTGCTTGCCAGTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCT 1196384
Query 44237 TCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACC 44296
||||| ||| | ||| | || |||| || || | || ||| |||||||
Sbjct 1196383 TCCTTATCC-------TGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCCAGG 1196331
Query 44297 GTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGC 44335
|| || ||||| || || |||||||||||||| || |||
Sbjct 1196330 GTGATGGTCTTCCCAGTAAGGGTCTTCACGAAAATCTGC 1196292
>seq331
Length=2147541
Score = 105 bits (116), Expect = 5e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||||||||| || ||||| ||| ||||||||| |||||||| || | | ||
Sbjct 851459 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 851400
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||| ||||| || ||||||||| | |||||||| | ||| | ||||||
Sbjct 851399 CCATCTTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGGAATTCCTTCC 851340
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| ||||| ||| | || |||| || || | || ||| ||| | ||
Sbjct 851339 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTTGAGGGTG 851280
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| || || | ||| |||||||| || |||||
Sbjct 851279 ATGGTCTTCCCGGTAAAGGTTTTCACGAAAATCTGCAT 851242
>seq5307
Length=1324
Score = 95.1 bits (104), Expect = 9e-15
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || |||| ||| | | ||||| ||| || ||| ||| || ||||| || || ||
Sbjct 958 ATACCACCTCGCAGACGAAGCACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCT 899
Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227
| ||| ||| | || |||||||| || || ||||| |||| ||||||||| || |
Sbjct 898 GAGAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGT 839
Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTC 44286
|| | || ||||| || || || |||| ||| | || ||||| || ||
Sbjct 838 GGGATGCCCTCCTTGTCTTGGATTTTA-GCTTTGGCATTCTCAATAGTGTCACTGGGCTC 780
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || || ||||| ||||| ||||||||||| ||||| |||||
Sbjct 779 GACCTCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 729
>seq717
Length=839118
Score = 87.8 bits (96), Expect = 1e-12
Identities = 157/227 (69%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 44112 CCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGA 44171
|| ||| ||| | | ||||| ||| || ||| ||| || ||||| || | || | ||
Sbjct 563444 CCACTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTACAGTCTGAGA 563503
Query 44172 GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCA 44231
| ||| | || |||||||| || || ||||| |||| | ||||||| || | || |
Sbjct 563504 GAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGTGGGA 563563
Query 44232 CACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACC 44290
|| ||||| || || || |||| | ||| | || ||||| || || |||
Sbjct 563564 TGCCCTCCTTGTCTTGGATTTTA-GCTTTGACATTCTCAATAGTGTCACTGGGCTCGACC 563622
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| | || || ||||| ||||| ||||||||||| ||||| |||||
Sbjct 563623 TCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 563669
>seq298
Length=2265018
Score = 87.8 bits (96), Expect = 1e-12
Identities = 160/231 (69%), Gaps = 5/231 (2%)
Strand=Plus/Plus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || |||| ||| | | ||||| ||| || ||| ||| || ||||| || || ||
Sbjct 584596 ATACCACCTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTCTAGTCA 584655
Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227
| |||| ||| | || |||||||| || || |||| |||| ||||||||| || |
Sbjct 584656 GAGAGT--GCGGCCATCCTCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGT 584713
Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTC 44286
|| | || ||||| || || || |||| | ||| | || ||||| || ||
Sbjct 584714 GGGATGCCCTCCTTGTC--TTGGATTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTC 584771
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || || ||||| ||||| ||||||||||| ||| | |||||
Sbjct 584772 GACCTCAGGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGGTCTGCAT 584822
>seq416
Length=1521731
Score = 84.2 bits (92), Expect = 2e-11
Identities = 153/221 (69%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||||||||| |||||||| ||| ||||| | | |||||||| || | | |||
Sbjct 880270 AGTCTCAACACAAGGTGAAGAGTGGACTCCTGTGGAATGTTGTAGTCAGACAAAGTGCGT 880329
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| | |||| || | || |||||| ||| | |||||| | | ||| | ||||||
Sbjct 880330 CCCGCTGCCAGTTGTCTGCCAGCAAAGCTCAGTCTTTGCTGAACAGGAGGAATTCCTTCC 880389
Query 44240 TTTTCCGTTATCTTCTGC-TTCAATGTTCCTATGGTGTCGGC--GGATTCCACCTCCACC 44296
|| || ||||| | ||| || ||| || ||| || || ||| ||||| |
Sbjct 880390 TTAACCTGGATCTTGACCTTTCCATTTTC---TGTTGTACGCAAGGGTTCAACCTCGAGA 880446
Query 44297 GTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || ||||| || ||||| |||| ||| ||||||||
Sbjct 880447 GTAATGGTTTTTCCAGTAAGGGTTTTCATGAAAATTTGCAT 880487
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359957183123307
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |