Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq808 118 8e-22 seq265 118 8e-22 seq376 105 5e-18 seq331 105 5e-18 seq5307 95.1 9e-15 seq717 87.8 1e-12 seq298 87.8 1e-12 seq416 84.2 2e-11 >seq808 Length=762264 Score = 118 bits (130), Expect = 8e-22 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC-GGCGAGTTGGCG 44178 ||||||||||| || ||||| ||| ||||||||| |||||||| || | | || | | Sbjct 448029 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGAT-ATG 447971 Query 44179 CTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTC 44238 | || ||||| ||||| || |||||||||| | |||||||| | ||| | ||||| Sbjct 447970 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTC 447911 Query 44239 CTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGT 44298 ||| ||| ||||| ||| | || |||| || || | || ||| ||||| | || Sbjct 447910 CTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGGGT 447851 Query 44299 AATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| || || ||||| |||| ||| || ||||| Sbjct 447850 GATGGTCTTCCCAGTAAGGGTTTTCATGAAAATCTGCAT 447812 >seq265 Length=2261556 Score = 118 bits (130), Expect = 8e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||||||| || ||||| ||| ||||||||| |||||||| || | | || Sbjct 841133 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 841074 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||| ||||| || ||||||||| | |||||||| | ||| | |||||| Sbjct 841073 CCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTCC 841014 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||| | || |||| || || | || ||| ||||| | || Sbjct 841013 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTG 840954 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| || || ||||| |||||||| || ||||| Sbjct 840953 ATGGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCAT 840916 >seq376 Length=1527771 Score = 105 bits (116), Expect = 5e-18 Identities = 156/219 (71%), Gaps = 13/219 (6%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGA--GT-TGG 44176 ||||||||||| || ||||| ||| ||||||||| |||||||| || | | || || Sbjct 1196500 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGT 1196441 Query 44177 CGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCT 44236 | | || ||||| ||||| || | |||||||| | |||||||| | ||| | ||| Sbjct 1196440 C---CATCTTCCAGTTGCTTGCCAGTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCT 1196384 Query 44237 TCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACC 44296 ||||| ||| | ||| | || |||| || || | || ||| ||||||| Sbjct 1196383 TCCTTATCC-------TGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCCAGG 1196331 Query 44297 GTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGC 44335 || || ||||| || || |||||||||||||| || ||| Sbjct 1196330 GTGATGGTCTTCCCAGTAAGGGTCTTCACGAAAATCTGC 1196292 >seq331 Length=2147541 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||||||| || ||||| ||| ||||||||| |||||||| || | | || Sbjct 851459 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 851400 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||| ||||| || ||||||||| | |||||||| | ||| | |||||| Sbjct 851399 CCATCTTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGGAATTCCTTCC 851340 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||| | || |||| || || | || ||| ||| | || Sbjct 851339 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTTGAGGGTG 851280 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| || || | ||| |||||||| || ||||| Sbjct 851279 ATGGTCTTCCCGGTAAAGGTTTTCACGAAAATCTGCAT 851242 >seq5307 Length=1324 Score = 95.1 bits (104), Expect = 9e-15 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || |||| ||| | | ||||| ||| || ||| ||| || ||||| || || || Sbjct 958 ATACCACCTCGCAGACGAAGCACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCT 899 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | ||| ||| | || |||||||| || || ||||| |||| ||||||||| || | Sbjct 898 GAGAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGT 839 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTC 44286 || | || ||||| || || || |||| ||| | || ||||| || || Sbjct 838 GGGATGCCCTCCTTGTCTTGGATTTTA-GCTTTGGCATTCTCAATAGTGTCACTGGGCTC 780 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || || ||||| ||||| ||||||||||| ||||| ||||| Sbjct 779 GACCTCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 729 >seq717 Length=839118 Score = 87.8 bits (96), Expect = 1e-12 Identities = 157/227 (69%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 44112 CCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGA 44171 || ||| ||| | | ||||| ||| || ||| ||| || ||||| || | || | || Sbjct 563444 CCACTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTACAGTCTGAGA 563503 Query 44172 GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCA 44231 | ||| | || |||||||| || || ||||| |||| | ||||||| || | || | Sbjct 563504 GAGTGCGGCCATCCTCCAGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGTGGGA 563563 Query 44232 CACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACC 44290 || ||||| || || || |||| | ||| | || ||||| || || ||| Sbjct 563564 TGCCCTCCTTGTCTTGGATTTTA-GCTTTGACATTCTCAATAGTGTCACTGGGCTCGACC 563622 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || | || || ||||| ||||| ||||||||||| ||||| ||||| Sbjct 563623 TCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 563669 >seq298 Length=2265018 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/231 (69%), Gaps = 5/231 (2%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || |||| ||| | | ||||| ||| || ||| ||| || ||||| || || || Sbjct 584596 ATACCACCTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTCTAGTCA 584655 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | |||| ||| | || |||||||| || || |||| |||| ||||||||| || | Sbjct 584656 GAGAGT--GCGGCCATCCTCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGT 584713 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTC 44286 || | || ||||| || || || |||| | ||| | || ||||| || || Sbjct 584714 GGGATGCCCTCCTTGTC--TTGGATTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTC 584771 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || || ||||| ||||| ||||||||||| ||| | ||||| Sbjct 584772 GACCTCAGGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGGTCTGCAT 584822 >seq416 Length=1521731 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/221 (69%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||||||| |||||||| ||| ||||| | | |||||||| || | | ||| Sbjct 880270 AGTCTCAACACAAGGTGAAGAGTGGACTCCTGTGGAATGTTGTAGTCAGACAAAGTGCGT 880329 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | | |||| || | || |||||| ||| | |||||| | | ||| | |||||| Sbjct 880330 CCCGCTGCCAGTTGTCTGCCAGCAAAGCTCAGTCTTTGCTGAACAGGAGGAATTCCTTCC 880389 Query 44240 TTTTCCGTTATCTTCTGC-TTCAATGTTCCTATGGTGTCGGC--GGATTCCACCTCCACC 44296 || || ||||| | ||| || ||| || ||| || || ||| ||||| | Sbjct 880390 TTAACCTGGATCTTGACCTTTCCATTTTC---TGTTGTACGCAAGGGTTCAACCTCGAGA 880446 Query 44297 GTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || ||||| || ||||| |||| ||| |||||||| Sbjct 880447 GTAATGGTTTTTCCAGTAAGGGTTTTCATGAAAATTTGCAT 880487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359957183123307