Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq23 170 3e-37 seq881 87.8 3e-12 >seq23 Length=7404865 Score = 170 bits (188), Expect = 3e-37 Identities = 172/224 (77%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 9256 GTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGAACATCGCACACC 9315 |||||||||| ||||| ||| |||||| ||||| || ||||| || ||||| ||||| Sbjct 3588189 GTCTGGAACAACTGCTCATCATCCCATTCCGGATGCTCCTGTTTAAGCACATCACACACT 3588248 Query 9316 CTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGTACCAGGCCAAAA 9375 |||||||| || | ||||| || ||||| |||||||| || ||||| |||||||| || Sbjct 3588249 CTGTTGTGCTCTCGAAGCCAAATCGTGGCATACATCATCAGGCCAGGCACCAGGCCGAAC 3588308 Query 9376 GCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9435 |||| || || ||||| | |||| || ||| || || | || ||||||||||| | | Sbjct 3588309 ACCTCCTGCCCCACAGCAAACCGCAGGTGTTCAGGGACATGAGGGGGATAGATCATCTCC 3588368 Query 9436 ACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAAT 9479 ||||| |||||||| | ||| ||||||| || || ||||| Sbjct 3588369 ACCTGAGAATCTTTGACTGTGGGAGGATACACCTCTCCATCAAT 3588412 Score = 129 bits (142), Expect = 8e-25 Identities = 199/284 (70%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 8303 GGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCG 8362 ||||| || || ||||| | |||| ||||||||||| | || | |||| ||| Sbjct 3586619 GGACAGCCTTTCACGTTATTGCAGATAAGAGACTGAATTGAGGCAGTGTTGATGATTTTA 3586678 Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422 || || || ||||| || || ||||| |||||||||||| || || || || || Sbjct 3586679 AAACCTACTTCTCCACCAAAAGTGCTAGGCTTCCAGTACTGAGGAGAACATATAGGATTG 3586738 Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482 |||| || || || | |||||| || || || | || | ||| ||||||| |||||| Sbjct 3586739 CCCATAAGTCCCTTCAAGGAGAAAGGTGCTCCAAGTTCTACCATGGTCTCACCAAAGATG 3586798 Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCT 8542 |||| ||||| ||||| || |||| | | | |||||||||| || || ||||| Sbjct 3586799 GCGTCTGGACGAGGCTTCTCTACCAGAAGGGCAGGATACAGCTCCATGGCATCAACGTCA 3586858 Query 8543 CCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586 || || ||||| | || ||||| || ||||| || ||||| Sbjct 3586859 CCATAGAGGGCTTCTAACTCCGCAGCCATTTCCTTCTCGCCTGT 3586902 Score = 86.0 bits (94), Expect = 9e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967 |||||||| || || | ||||| || || |||| || || | ||| |||| || | Sbjct 2331935 TCACCTTTCACACCCATGGGAGTCGGGCAGTCGTCAGCCACAGCAGGAAGAACTCTGGTA 2331994 Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027 |||||||||| ||| || || |||||||||||| ||| | | | | ||||| | Sbjct 2331995 TAATAGGAGATATTAGAAAAGGCTTCCCAGCTTTTGTAACCATGCTGTACATTGTAAGTT 2332054 Query 10028 GGAGGGCTGTCAATCAAATCGGATCTACCTGA 10059 || |||||||||||||||| ||||| |||| Sbjct 2332055 GGCGGGCTGTCAATCAAATGTGATCTGGCTGA 2332086 Score = 84.2 bits (92), Expect = 3e-11 Identities = 183/266 (69%), Gaps = 6/266 (2%) Strand=Plus/Plus Query 8944 CTTACTCGGCCGGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGAGTC 9003 ||||| | || || ||||| | |||| ||||| || | |||||| | || || | Sbjct 3587561 CTTACCCTCCCAGCAATTTGCCTGCTGAATGATTCAACAAACTGGGTCAGCCCATGTTCC 3587620 Query 9004 ATGAGTATGGAATTGTTGTAGACGAAGTTAACG-TAGTCATACTT-TGTTTTATCAATCT 9061 || | ||| || |||||||||| ||| | || |||| |||| || | | ||||| | Sbjct 3587621 ATTAATATCGAGTTGTTGTAGA-GAAACTGCCGATAGTTGTACTCCTGATCT-TCAATTT 3587678 Query 9062 CAAATGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATAC 9121 ||| | || |||| || | ||||||||| || | | |||||||||| | | |||| Sbjct 3587679 GAAAGGTGTCAGGCAGAAGGGGATGCCAGTGGTAGAGCGTGTTAAACTCAGCAGCAATAC 3587738 Query 9122 GATTTTGGTACTGGAA-CGAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAGCTGAAAA 9180 | || ||||||||||| | | ||| ||||| || || | |||| ||| | ||| Sbjct 3587739 GGTTCTGGTACTGGAATTGTTGGTTGAAA-AGCAGCTCTGGGTCAAACTTCAGTTTAAAG 3587797 Query 9181 TGGTAGCCGCTGAGCTGCTGAACGTA 9206 || ||||| || | ||||| || || Sbjct 3587798 TGATAGCCACTCAAGTGCTGTACATA 3587823 >seq881 Length=711898 Score = 87.8 bits (96), Expect = 3e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291 || ||||||| |||||| || | |||||||| || ||||| || ||| || || Sbjct 94254 TCACCGATAAGGATGAGGCGGGCCGTCTGGAAGAGCTGCTCATCGTCCCAGGTGGGGTGC 94313 Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351 || ||||| | || ||||| | |||||| || | ||||||| ||||| || | | Sbjct 94314 TCAGCCTTCAGCAGGTCACACACACGGTTGTGCTCGCGCAGCCAGAGGGTGGCATAGAGC 94373 Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCA 9394 ||||||||||| | ||| ||||| | || || || ||||||| Sbjct 94374 ATGAGCCCAGGAAGCAGTCCAAACACTTCCTGGCCCACAGCCA 94416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716808956571840