Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_033176.1
Length=224064
Score E
Sequences producing significant alignments: (Bits) Value
seq23 170 3e-37
seq881 87.8 3e-12
>seq23
Length=7404865
Score = 170 bits (188), Expect = 3e-37
Identities = 172/224 (77%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 9256 GTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGAACATCGCACACC 9315
|||||||||| ||||| ||| |||||| ||||| || ||||| || ||||| |||||
Sbjct 3588189 GTCTGGAACAACTGCTCATCATCCCATTCCGGATGCTCCTGTTTAAGCACATCACACACT 3588248
Query 9316 CTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGTACCAGGCCAAAA 9375
|||||||| || | ||||| || ||||| |||||||| || ||||| |||||||| ||
Sbjct 3588249 CTGTTGTGCTCTCGAAGCCAAATCGTGGCATACATCATCAGGCCAGGCACCAGGCCGAAC 3588308
Query 9376 GCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9435
|||| || || ||||| | |||| || ||| || || | || ||||||||||| | |
Sbjct 3588309 ACCTCCTGCCCCACAGCAAACCGCAGGTGTTCAGGGACATGAGGGGGATAGATCATCTCC 3588368
Query 9436 ACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAAT 9479
||||| |||||||| | ||| ||||||| || || |||||
Sbjct 3588369 ACCTGAGAATCTTTGACTGTGGGAGGATACACCTCTCCATCAAT 3588412
Score = 129 bits (142), Expect = 8e-25
Identities = 199/284 (70%), Gaps = 0/284 (0%)
Strand=Plus/Plus
Query 8303 GGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCG 8362
||||| || || ||||| | |||| ||||||||||| | || | |||| |||
Sbjct 3586619 GGACAGCCTTTCACGTTATTGCAGATAAGAGACTGAATTGAGGCAGTGTTGATGATTTTA 3586678
Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422
|| || || ||||| || || ||||| |||||||||||| || || || || ||
Sbjct 3586679 AAACCTACTTCTCCACCAAAAGTGCTAGGCTTCCAGTACTGAGGAGAACATATAGGATTG 3586738
Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482
|||| || || || | |||||| || || || | || | ||| ||||||| ||||||
Sbjct 3586739 CCCATAAGTCCCTTCAAGGAGAAAGGTGCTCCAAGTTCTACCATGGTCTCACCAAAGATG 3586798
Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCT 8542
|||| ||||| ||||| || |||| | | | |||||||||| || || |||||
Sbjct 3586799 GCGTCTGGACGAGGCTTCTCTACCAGAAGGGCAGGATACAGCTCCATGGCATCAACGTCA 3586858
Query 8543 CCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586
|| || ||||| | || ||||| || ||||| || |||||
Sbjct 3586859 CCATAGAGGGCTTCTAACTCCGCAGCCATTTCCTTCTCGCCTGT 3586902
Score = 86.0 bits (94), Expect = 9e-12
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967
|||||||| || || | ||||| || || |||| || || | ||| |||| || |
Sbjct 2331935 TCACCTTTCACACCCATGGGAGTCGGGCAGTCGTCAGCCACAGCAGGAAGAACTCTGGTA 2331994
Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027
|||||||||| ||| || || |||||||||||| ||| | | | | ||||| |
Sbjct 2331995 TAATAGGAGATATTAGAAAAGGCTTCCCAGCTTTTGTAACCATGCTGTACATTGTAAGTT 2332054
Query 10028 GGAGGGCTGTCAATCAAATCGGATCTACCTGA 10059
|| |||||||||||||||| ||||| ||||
Sbjct 2332055 GGCGGGCTGTCAATCAAATGTGATCTGGCTGA 2332086
Score = 84.2 bits (92), Expect = 3e-11
Identities = 183/266 (69%), Gaps = 6/266 (2%)
Strand=Plus/Plus
Query 8944 CTTACTCGGCCGGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGAGTC 9003
||||| | || || ||||| | |||| ||||| || | |||||| | || || |
Sbjct 3587561 CTTACCCTCCCAGCAATTTGCCTGCTGAATGATTCAACAAACTGGGTCAGCCCATGTTCC 3587620
Query 9004 ATGAGTATGGAATTGTTGTAGACGAAGTTAACG-TAGTCATACTT-TGTTTTATCAATCT 9061
|| | ||| || |||||||||| ||| | || |||| |||| || | | ||||| |
Sbjct 3587621 ATTAATATCGAGTTGTTGTAGA-GAAACTGCCGATAGTTGTACTCCTGATCT-TCAATTT 3587678
Query 9062 CAAATGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATAC 9121
||| | || |||| || | ||||||||| || | | |||||||||| | | ||||
Sbjct 3587679 GAAAGGTGTCAGGCAGAAGGGGATGCCAGTGGTAGAGCGTGTTAAACTCAGCAGCAATAC 3587738
Query 9122 GATTTTGGTACTGGAA-CGAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAGCTGAAAA 9180
| || ||||||||||| | | ||| ||||| || || | |||| ||| | |||
Sbjct 3587739 GGTTCTGGTACTGGAATTGTTGGTTGAAA-AGCAGCTCTGGGTCAAACTTCAGTTTAAAG 3587797
Query 9181 TGGTAGCCGCTGAGCTGCTGAACGTA 9206
|| ||||| || | ||||| || ||
Sbjct 3587798 TGATAGCCACTCAAGTGCTGTACATA 3587823
>seq881
Length=711898
Score = 87.8 bits (96), Expect = 3e-12
Identities = 117/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291
|| ||||||| |||||| || | |||||||| || ||||| || ||| || ||
Sbjct 94254 TCACCGATAAGGATGAGGCGGGCCGTCTGGAAGAGCTGCTCATCGTCCCAGGTGGGGTGC 94313
Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351
|| ||||| | || ||||| | |||||| || | ||||||| ||||| || | |
Sbjct 94314 TCAGCCTTCAGCAGGTCACACACACGGTTGTGCTCGCGCAGCCAGAGGGTGGCATAGAGC 94373
Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCA 9394
||||||||||| | ||| ||||| | || || || |||||||
Sbjct 94374 ATGAGCCCAGGAAGCAGTCCAAACACTTCCTGGCCCACAGCCA 94416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716808956571840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |