Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq265 154 4e-32 seq808 152 1e-31 seq331 140 8e-28 seq920 136 1e-26 seq376 123 6e-23 seq71 113 1e-19 seq188 105 2e-17 >seq265 Length=2261556 Score = 154 bits (170), Expect = 4e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| || || || || || |||||||||||||| ||| ||| || Sbjct 840919 CAGATTTTCGTGAAAACCCTTACCGGGAAGACCATCACCCTCGAGGTTGAACCCTCGGAT 840978 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||| ||||| || |||||||| ||||| || |||||| Sbjct 840979 ACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAA 841038 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| ||||| || || || || || ||||||||| | ||| | | || || ||| | Sbjct 841039 AGACCGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATT 841098 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || || || || |||||||| |||||||| Sbjct 841099 CAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 841133 >seq808 Length=762264 Score = 152 bits (168), Expect = 1e-31 Identities = 165/216 (76%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||| ||||||| || || || || || |||||||||||||| ||| |||||| Sbjct 447815 CAGATTTTCATGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACCCTCAGAT 447874 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||| ||||| || |||||||| ||||| || |||||| Sbjct 447875 ACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAA 447934 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 |||| ||||| || || || || || ||||||||| | ||||| | || || ||| | Sbjct 447935 AGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACATA-TCTTGTCTGACTACAACAT 447993 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || || || || |||||||| |||||||| Sbjct 447994 TCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 448029 >seq331 Length=2147541 Score = 140 bits (154), Expect = 8e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| | || || || || ||||||||| ||| ||| ||| || Sbjct 851245 CAGATTTTCGTGAAAACCTTTACCGGGAAGACCATCACCCTCAAGGCTGAACCCTCGGAT 851304 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||| ||||| || |||||||| ||||| || |||||| Sbjct 851305 ACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAA 851364 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| ||||| || || || || || ||||||||| | ||| | | || || ||| | Sbjct 851365 AGACAGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATT 851424 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || || || || |||||||| |||||||| Sbjct 851425 CAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 851459 >seq920 Length=534542 Score = 136 bits (150), Expect = 1e-26 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| || || || || || ||||||||| |||| ||| ||| || Sbjct 150227 CAGATTTTCGTGAAAACCCTTACTGGGAAGACCATCACCCTCAAGGTTGAACCCTCGGAT 150168 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || | || || || || ||||| ||| | || |||||||| ||||| || |||||| Sbjct 150167 ACAAAAGAAAATGTAAAGGCCAAGATCCAGAATAAGGAAGGAATTCCTCCTGATCAGCAA 150108 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || || || || ||||||||| | ||| | | || || ||| | Sbjct 150107 AGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATT 150048 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || | || || ||||||| |||||||| Sbjct 150047 CAAAAGGAGTTCACTCTTCATCTTGGGTTGAGACT 150013 >seq376 Length=1527771 Score = 123 bits (136), Expect = 6e-23 Identities = 157/215 (73%), Gaps = 7/215 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || || || || || || |||||||| ||||| ||| ||| || Sbjct 1196293 CAGATTTTCGTGAAGACCCTTACTGGGAAGACCATCACCCTGGAGGTTGAACCCTCGGAT 1196352 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || |||| ||||| || |||||||| ||||| || |||||| Sbjct 1196353 ACAATAGAAAATGT------AAAG-GCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAA 1196405 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| | || || || || ||||||||| ||| | | || || ||| | Sbjct 1196406 AGACTGATCTTTACTGGCAAGCAACTGGAAGATGGACATACTTTGTCTGACTACAACATT 1196465 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || || || || |||||||| |||||||| Sbjct 1196466 CAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 1196500 >seq71 Length=4921646 Score = 113 bits (124), Expect = 1e-19 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| || | || || ||||| ||| ||| ||| ||| || Sbjct 1110425 CAGATTTTCGTGAAAACCCTGGCTCTGAAGACCATCACTCTCACGGTTGAACCCTCGGAT 1110366 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||| ||| | || |||||||| ||||| || |||||| Sbjct 1110365 ACAATAGAAAATGTAAAGGCCAAGATCCAGAATAAGGAAGGAATTCCTCCTGATCAGCAA 1110306 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || || | || ||||| ||| | ||| | | ||| ||| | Sbjct 1110305 AGACTAATCTTTGCTGGCAAGTAACTGGAAGAGGGACGTACTTT----GGTTACAACATT 1110250 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || || || || |||||||| |||||||| Sbjct 1110249 CAAAAGGAGTCCACTCTTCATCTTGTATTGAGACT 1110215 >seq188 Length=3041327 Score = 105 bits (116), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| || || || ||||| ||||||||||||| |||| |||||| Sbjct 1142954 CAGATTTTCGTGAAAACCCTGACTGGGAAAACCATCACCCTCGAGGCTGAAACCTCAGAT 1142895 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || | || || ||||| | ||| || ||||| || ||||| | |||||| Sbjct 1142894 ACAATAGAACATGTAAAGGCCAAGATCCGGGATAAGGAAGGGATTCCTCCTGCTCAGCAA 1142835 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | || || | || | || |||| |||| | ||| || | || ||| | Sbjct 1142834 ATACTGAGGTTTGCTG--AAGTAACTGGAAGCTGGATGCACTTTT----ACTACAACATT 1142781 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 | ||| || || | || |||||||| |||||||| Sbjct 1142780 CCAAAGGAGTCCATTCTTCATCTTGTGTTGAGACT 1142746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203614433935774