Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq45 86.0 6e-12
>seq45
Length=5545317
Score = 86.0 bits (94), Expect = 6e-12
Identities = 158/228 (69%), Gaps = 4/228 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| | ||| | | ||||| ||||| ||| ||| ||||| || |||||||| |||
Sbjct 1737672 CCGCCCCACAGATGGAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTATAGTCTGAG 1737731
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGG-CGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| ||| | | || || ||||| | ||| | || ||||| | ||| ||||| | ||
Sbjct 1737732 AGAGTGTGACCATCCTCCAGCTGTTGGCCCCACAAAAATCAGACTCTGCTGGTCAGGTGG 1737791
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814
| || ||||||||| |||||| |||| || | ||||| | | || ||
Sbjct 1737792 GATGCCCTCCTTGTCTTGGATTTTA-GCTTTGACATT--CTCAGTGGTGTCAGGCTTGAC 1737848
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || || || || || ||||| ||||| || |||||||||||
Sbjct 1737849 CTCGAGTGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAAATCTGCAT 1737896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462260248705200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |