Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_002665.1
Length=108873
Score E
Sequences producing significant alignments: (Bits) Value
seq1258 1745 0.0
seq701 185 6e-42
>seq1258
Length=759385
Score = 1745 bits (1934), Expect = 0.0
Identities = 1413/1717 (82%), Gaps = 66/1717 (4%)
Strand=Plus/Minus
Query 107084 TCCCAGCATGACTAGCTGGTTTGCAGCATCAGGTTACAGATGTCCATCCACAAG------ 107137
||||||||||| | ||| ||||| || |||| ||| ||| || || |||||
Sbjct 276540 TCCCAGCATGAATGGCTTGTTTGTAGGGTCAGATTATAGACCTCTGTCAACAAGCCAGGG 276481
Query 107138 -------GGTCTTAGGCAGGACTTGACTGAGGATATTTGTCTATAGAAGACATCTATCTT 107190
| || |||||||| |||||||||||||||||||||| |||||| ||
Sbjct 276480 ATAAGAGGTTCCTAGGCAGGTCTTGACTGAGGATATTTGTCTAGAGAAGAAAT------- 276428
Query 107191 TACCATCACTCTGGAGTTGAACTTGATGTT--------------CTGGATTAGTTTGTAA 107236
||| || ||||||||| ||||||||| | || |||||||||||
Sbjct 276427 ----ATCCCTTTGGAGTTGAGCTTGATGTTTCTGTGAATACATTCAGGGTTAGTTTGTAA 276372
Query 107237 TTAAAGGCATTTTGTTCTGTCCAAGGATC---TCCTCCTCCACCTTGCCTGTGCCCAAAC 107293
|| ||||||||||||||||||||||||| ||||||||| |||| ||||||||| |||
Sbjct 276371 TTGAAGGCATTTTGTTCTGTCCAAGGATTCCATCCTCCTCCTCCTTCCCTGTGCCCCAAC 276312
Query 107294 TCTCCTGATCTCCCATCCCATGAAGATGGCTGGGTGGAAGAAGAAGCTTTGCCGGGGACA 107353
| ||| | || ||| |||||||||||| | ||||||||||||||| | ||| ||
Sbjct 276311 TG--CTGGTTTCTCATTCCATGAAGATGGTTTGGTGGAAGAAGAAGCCCTTTCGGCAGCA 276254
Query 107354 TCATCTGTGGGCCCTGGGCTGCTATATGCTGCTGGCCGTTGTTTCTCTGAGACTTTCCCT 107413
||| ||||||||||||||||||||||||||||||||||| ||| ||||||| |||| ||
Sbjct 276253 TCACCTGTGGGCCCTGGGCTGCTATATGCTGCTGGCCGTGGTTGCTCTGAGGTTTTCTCT 276194
Query 107414 CAGGTTTAAATGTGATGTAGATTCCTTGGATCTGGAGTCCAGGGACTTCCAGAGTCAGCA 107473
|||||| |||||||| | || ||| |||||||||||||||||||||| ||| ||||
Sbjct 276193 CAGGTTGAAATGTGACTTTGAATCCCTGGATCTGGAGTCCAGGGACTTTTGGAGCCAGCC 276134
Query 107474 CTGTAGGGACATGTTGTACAATAGCCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTC 107533
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 276133 CTGTAGGGACATCTTGTACAAGTCCCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTC 276074
Query 107534 TGGGATCACGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGACAACCTGGAAGT 107593
||| |||| |||||||||||| | |||||| |||| ||||| ||||||||||| ||
Sbjct 276073 TGGAATCATCCGAGGGGACCAGCAGGCAGTGACGGAGGCTCTCCTGGACAACCTGGAGGT 276014
Query 107594 GAAGAAAAAGCGGTCGCCTCTCACTGGCACCTATTACCTCAACATAACCAGAGACTGTGA 107653
||||| |||||| ||| |||| | |||| | ||||| ||||| ||||||||||||||
Sbjct 276013 CAAGAAGAAGCGGGAGCCCTTCACAGACACCGACTACCTTAACATGACCAGAGACTGTGA 275954
Query 107654 GCGCTTCAAGGCCCAAAGGAAGTTCATACAGTTCCCACTGAGTAAAGAAGAGCTAGACTT 107713
|| ||| |||||| ||||||||||||||| |||||| ||||| ||||||||| |||||||
Sbjct 275953 GCACTTTAAGGCCGAAAGGAAGTTCATACGGTTCCCTCTGAGCAAAGAAGAGTTAGACTT 275894
Query 107714 CCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCG 107773
||| ||||| ||||| |||||||||||||||||||| || ||||||||| | ||||||||
Sbjct 275893 CCCTATTGCATACTCTATGGTGGTCCATGAGAAGATCGAGAACTTTGAAAGACTGCTGCG 275834
Query 107774 AGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGAC 107833
||| ||||||||||||||||||||||||||||||| ||||||| ||| |||||||| ||
Sbjct 275833 AGCTTTGTATGCCCCTCAGAACATATACTGTGTCCATGTGGATGAGAAATCCCCAGAAAC 275774
Query 107834 TTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAA 107893
|||||||||||| |||||||| ||| | || |||||||| ||||||||||| ||||||||
Sbjct 275773 TTTCAAAGAGGCAGTCAAGGCGATTGTGTCATGCTTCCCAAATGTCTTCATAGCCAGTAA 275714
Query 107894 GTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGA 107953
|||||| | |||||||||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct 275713 GTTGGTTCGGGTGGTTTATGCCTCCTGGTCCAGGGTGCAGGCTGACCTAAACTGTATGGA 275654
Query 107954 AGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTT 108013
||||||||||||||||||||||| |||| ||||||||||||||||| ||||| |||||
Sbjct 275653 GGACTTGCTCCAGAGCTCAGTGCCGTGGAGATACTTACTGAATACATGTGGGACGGACTT 275594
Query 108014 CCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAG 108073
|| |||||||||||||| ||||||||||||||||||||||||||||| || ||||||||
Sbjct 275593 TCCTATAAAGACCAATGCTGAGATGGTCCTGGCCCTCAAGATGTTGAATGGGAAGAACAG 275534
Query 108074 TATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGT 108133
||||||||| || |||| |||||| ||||| |||||||| ||| | |||||||||
Sbjct 275533 TATGGAGTCAGAAAAACCTACTGAGTACAAAAGGTCTCGCTGGACATATCACTATGAGGT 275474
Query 108134 GACAGACACACTGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCAT 108193
|||||| || ||||| ||||||||||||||||| |||||||| |||||| |||| ||
Sbjct 275473 GACAGATGCATTGTACATAACCAGCAAGATGAAGGATCCTCCCCCGGATAATATACCTAT 275414
Query 108194 GTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAA 108253
||||||||||||||||||| ||||||| ||||||| ||||||| |||||||| || ||
Sbjct 275413 GTTCACAGGGAATGCCTATATTGTGGCTTCTCGAGATTTTGTCCGGCATGTCTTGGAGAA 275354
Query 108254 CCCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCT 108313
||| || |||||||||||| | || ||||| |||||||||||||||||||| ||||| ||
Sbjct 275353 CCCCAAGTCCCAAAGACTGATCGAGTGGGTGAAAGACACCTATAGCCCCGATGAACATCT 275294
Query 108314 CTGGGCCACCCTTCAGCGTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTA 108373
|||||||||||||||||||| ||||||||||| || ||| |||| |||||||||||
Sbjct 275293 GTGGGCCACCCTTCAGCGTGCACCGTGGATGCCGGGTTCTATTCCCTACCACCCCAAGTT 275234
Query 108374 TCACATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGA 108433
||||||||| |||||||| ||||| |||||||| ||||||||||| |||| ||||||||
Sbjct 275233 TCACATCTCTGACATGACAGCCATTGCCAGGCTGGTCAAGTGGCAAAACCATGAGGGAGA 275174
Query 108434 TGTCAGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCAT 108493
|||| |||||||| ||||||||||| |||||||| | ||| | | || | |||| |
Sbjct 275173 CATCAGTATGGGGGCACCTTATGCACCTTGCTCTGGGACCCACCAGCGGTCTGTCTGTGT 275114
Query 108494 TTACGGGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTT 108553
||| ||| | ||||||||| | |||||||| || ||||||||||| ||||| ||||||||
Sbjct 275113 TTATGGGACTGGGGACCTGCATTGGATTCTTCAAAACCATCACCTGTTGGCTAACAAGTT 275054
Query 108554 TGACCCGAGGGTGGATGATAACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGC 108613
|||||| | ||||||||| || || || |||||||||||||||||| ||||| |||||||
Sbjct 275053 TGACCCAAAGGTGGATGACAATGTTCTTCAGTGCTTAGAAGAGTACTTACGTTATAAGGC 274994
Query 108614 CATCTATGGGACTGAACTTTGAGCT------------------GCACTGTGGGCCAGGGA 108655
|||||||||||||||||| |||| | | ||||||| |||| |
Sbjct 274993 CATCTATGGGACTGAACTCTGAGATACCCTATCAGAGAAGTGCTCCCTGTGGGGCAGGAA 274934
Query 108656 C-TGTGCCAACATGCCCAGGGCGTACTGGTACTGTGTGGGGTGGGGGACGAGGGCTGTGG 108714
| ||||| ||| ||||||||| || |||| || |||||||||||||| ||||| | |
Sbjct 274933 CATGTGCAAACGTGCCCAGGGGGTGCTGGGAC--AGTGGGGTGGGGGACCGGGGCTCTAG 274876
Query 108715 AATCCATGGCATCCCCCAGGGTCAGAGGGCTGCTTTG 108751
||||| |||||||||| | ||||| ||| |||| ||
Sbjct 274875 AATCCTTGGCATCCCCAA--GTCAGGGGGTTGCTATG 274841
>seq701
Length=996996
Score = 185 bits (204), Expect = 6e-42
Identities = 585/893 (66%), Gaps = 43/893 (5%)
Strand=Plus/Minus
Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747
|| || |||||||||||| ||| || ||||| || || || || ||||| ||| | ||
Sbjct 244022 CCCCTTAGTAAAGAAGAGGAAGAGTTTCCCATAGCATATTCTATAGTGGTTCATCACAAA 243963
Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807
||||||| |||| |||| ||| ||||| | ||| |||||||| | ||||| |
Sbjct 243962 ATTGAAATGCTTGACAGGCTCCTGAGAGCCATCTATATGCCTCAGAATTTCTACTGCATT 243903
Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867
|||||||| ||||| || | || | ||||| | | ||| ||||||
Sbjct 243902 CACGTGGACAGAAAGTCAGAGGATTCCTTTTTGGCCGCGGTGATTGGCATCGCGTCCTGC 243843
Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927
||| |||||||| |||||||| || ||| ||||| |||||||| ||| |
Sbjct 243842 TTCAGTAATGTCTTTGTGGCCAGTCAGCTGGAGAGTGTGGTGTATGCCTCGTGGAGTCGG 243783
Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGC--CATGGAAGT 107985
|| || || ||||| ||||| ||| ||||| | || ||| | | ||||| |||||||
Sbjct 243782 GTTCAGGCCGACCTCAACTGCATGCAAGACCT-CTACAG-GATGAGTGCAGACTGGAAGT 243725
Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGG 108045
|||| | ||| ||||| | || || ||||| || ||||| || || |||| |
Sbjct 243724 ACTTGATAAATCTTTGCGGTATGGATTTTCCCATTAAAACCAACCTGGAAATTGTCCGGA 243665
Query 108046 CCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAG---GTACCTTCTGAGTCCa 108102
|||||| | | | |||| | |||| | || ||||| | || || | |
Sbjct 243664 AGCTCAAGTCGCTAATGGGTGAAAACAACCTAGAAACTGAGAGAATGCCATCCAA---TA 243608
Query 108103 aaaaaaaTCGCTGGAAATACCGCTA---------TGAGGTGA--CAGAC--ACACTGTAC 108149
||||| | | |||||| | | || | | | || | ||| |||| |
Sbjct 243607 AAAAAGAAAGGTGGAAAAAGCATTACACAGTTGTTAATGGGAAGCTGACGAACACGG--- 243551
Query 108150 CCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCC 108209
|| ||| || | ||||||| | || | ||| |||| |||| | ||||
Sbjct 243550 -GGACTGACAAAAT---GCACCCTCCTCTCGAAA---CACCTCTGTTTTCAGGCAGTGCC 243498
Query 108210 TATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGA 108269
|| ||||||| | | | | || |||| |||| ||| ||| |||||
Sbjct 243497 TACTTTGTGGTCAGTAGGATGTACGTGGGGTATGTGCTAGAGAACGAAAAAATCCAAAAG 243438
Query 108270 CTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAG 108329
| | || |||| ||||| || || ||||| || || | ||||||||||| |||||
Sbjct 243437 TTTATGGAGTGGGCTAAAGATACATACAGCCCGGATGAGTATCTCTGGGCCACTATTCAG 243378
Query 108330 CGTGCTCCGTGGATG--CCTGGCTCTGT-TCCT--AGCCACCCCAAGTATCACATCTCAG 108384
| | ||| | |||| || ||||| | |||| ||||| |||||| |||| || |
Sbjct 243377 AG-GATCCCT-GATGTCCCAGGCTCACTGTCCTTAAGCCA---GAAGTATGACATGTCTG 243323
Query 108385 ACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGG 108444
||||| ||| || || ||| | ||||| |||||||| ||| || ||||| || ||
Sbjct 243322 ACATGCATGCAATTGCAAGGTTTGTCAAATGGCAGTATTTCGAAGGGGATGTTTCCAAGG 243263
Query 108445 GGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCG 108504
| || || || |||||||| ||| ||||| | | | | ||| | | ||| ||||
Sbjct 243262 GTGCCCCCTACCCACCCTGCCGTGGGGTCCATGTGCGTTCTGTGTGCGTGTTCGGAGCCG 243203
Query 108505 GGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGAC 108557
||||| || ||||||| || | || || ||| | || || ||||||||||||
Sbjct 243202 GGGACTTGAACTGGATGCTACGCAAGCACCACTTGTTTGCCAACAAGTTTGAC 243150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 348197869726014
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