Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq348 120 3e-22
seq975 109 5e-19
seq1818 100 3e-16
seq788 98.7 9e-16
seq203 98.7 9e-16
seq9145 87.8 2e-12
seq2520 87.8 2e-12
seq878 87.8 2e-12
seq293 87.8 2e-12
seq371 86.0 6e-12
seq182 86.0 6e-12
seq377 84.2 2e-11
seq1 84.2 2e-11
>seq348
Length=1658837
Score = 120 bits (132), Expect = 3e-22
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107
||||| |||||| || |||||||| ||||| || || || ||||| || || |||||
Sbjct 297577 ACCTCATCTTTGCTGGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTT 297518
Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167
|||| || ||||||||| || ||||| || ||||| ||||||||||||||||| ||
Sbjct 297517 CCCAGGTTCTGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTA 297458
Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196
|| ||||| ||| ||||| ||||| ||
Sbjct 297457 CCTGTCTCTGTCTGAGACTCAATGATGGC 297429
>seq975
Length=833997
Score = 109 bits (120), Expect = 5e-19
Identities = 159/222 (72%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || || || || || || || |||||| |||| |||||||||
Sbjct 558717 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCG 558658
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | |||| || || | || ||| |||||||| | || || ||
Sbjct 558657 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 558598
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
|||||| | || || || |||||||| || ||||||| | | | ||| || || ||
Sbjct 558597 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGCACTTTGTCTGACTA 558539
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
||||||||||| || || ||||||||||| || | |||||
Sbjct 558538 CAACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 558497
>seq1818
Length=636242
Score = 100 bits (110), Expect = 3e-16
Identities = 157/222 (71%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || || || || || || || |||||| |||| ||||||||
Sbjct 433230 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 433171
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | |||| || || | || ||| |||||||| | || || ||
Sbjct 433170 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 433111
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
|||||| | || || || |||||||| | ||||||| | | | ||| || || ||
Sbjct 433110 CAGCAGAGACTGATCTTTGCTGGCAAGTAACTGGAAGA-TGGACGCACTTTGTCTGACTA 433052
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
||||||||||| || || ||||||||||| || | |||||
Sbjct 433051 CAACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 433010
>seq788
Length=1000743
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| ||||| ||||| || |||||| | || || || ||
Sbjct 445223 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 445164
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | |||||| | ||| |||||||| ||| | ||||| ||||||
Sbjct 445163 GACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCAG 445104
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| | || || ||||||||| ||||||| ||| || || |||||
Sbjct 445103 CAGCGTCTGGTTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATAAT 445044
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| || ||||| || || || || |||| ||| | || |||| ||
Sbjct 445043 ATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCGCCTACGGGGTGG 444997
>seq203
Length=1941613
Score = 98.7 bits (108), Expect = 9e-16
Identities = 114/154 (74%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| ||||| ||||| | |||||| |||| ||||| ||
Sbjct 1856181 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGAACATCACCCTCGAGGTTGAGCCCAGT 1856122
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | |||||| | ||| |||||||| | | | ||||| ||||||
Sbjct 1856121 GACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGACATCCCGCCTGACCAG 1856062
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAG 31346
|||||||| || || || ||||||||| ||||||
Sbjct 1856061 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAG 1856028
>seq9145
Length=4041
Score = 87.8 bits (96), Expect = 2e-12
Identities = 154/222 (69%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || || || || || || || ||||| |||| ||||||||
Sbjct 500 AAGATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCC 441
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | |||| | || | || | | |||||||| | || || ||
Sbjct 440 TCAGATACAATAGAAAATATAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGAT 381
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
|||||| | || || || |||||||| || ||||||| | | | ||| || || ||
Sbjct 380 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGTACTTTGTCTGACTA 322
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
||||||||||| | || ||||||||||| || | |||||
Sbjct 321 CAACATTCAAAAGGCGTCCACTCTTCATCTTGTGTTGAGACT 280
>seq2520
Length=369870
Score = 87.8 bits (96), Expect = 2e-12
Identities = 154/222 (69%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || || || || || || || ||||| |||| ||||||||
Sbjct 183988 AAGATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCC 184047
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | |||| | || | || | | |||||||| | || || ||
Sbjct 184048 TCAGATACAATAGAAAATATAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGAT 184107
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
|||||| | || || || |||||||| || ||||||| | | | ||| || || ||
Sbjct 184108 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGTACTTTGTCTGACTA 184166
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
||||||||||| | || ||||||||||| || | |||||
Sbjct 184167 CAACATTCAAAAGGCGTCCACTCTTCATCTTGTGTTGAGACT 184208
>seq878
Length=898115
Score = 87.8 bits (96), Expect = 2e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
|| || || || || ||||| || |||||||| || |||||| ||||||| ||| |
Sbjct 679034 GCTTTTGCTGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCGTCAATATTCTGGCTC 679093
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGA 58081
|||||||||||||||||||| ||||| |||||| ||| ||
Sbjct 679094 AAGAAACGCGGCCTGATGCCTGGCCTCACGTTTTCCAATGA 679134
>seq293
Length=1771812
Score = 87.8 bits (96), Expect = 2e-12
Identities = 154/222 (69%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || ||||| | || || || ||||| |||| | ||||||
Sbjct 533871 AAGATGCAGATTTTCGTGAAAACTCTTATGGGGAAGACCATCACTCTCGAGGCTGAACCC 533930
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | |||| || || | || ||| |||||||| | || || ||
Sbjct 533931 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 533990
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
|||||| | | || || |||||||| || ||||||| | | | ||| || || ||
Sbjct 533991 CAGCAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGCACTCTGTCTGACTA 534049
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
|||| |||||| || || ||||||||||| || | |||||
Sbjct 534050 CAACACTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAGACT 534091
>seq371
Length=1453275
Score = 86.0 bits (94), Expect = 6e-12
Identities = 152/221 (69%), Gaps = 2/221 (1%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| ||||| || || || || | || || || ||||| |||| |||||| |
Sbjct 449567 AAGATGCAGATTTTTGTGAAAACCCTTATGGGGAAGACCATCACTCTCGAGGTTGAATCC 449626
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| | | || |||| || || | || ||| |||||||| | || || ||
Sbjct 449627 TCAGGTACAGTAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 449686
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|||||| || |||||| ||||||| || |||||||| ||| || | || ||
Sbjct 449687 CAGCAGA--CTGATATTCACTGGCAAGCAACTGGAAGACAGACAAACTTTGTGTGACTAC 449744
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
| ||||||||| || || ||||||||||| || | |||||
Sbjct 449745 AGCATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 449785
>seq182
Length=1985155
Score = 86.0 bits (94), Expect = 6e-12
Identities = 156/223 (70%), Gaps = 4/223 (2%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||| | || || || || || || || |||| | | || | ||||||
Sbjct 1379205 AAGATGCAGATTTTCCTGAAAACCCTTACGGGGAAGACCATCATCCTTGAGGCTGAACCC 1379146
Query 31250 TCCGACAGTGTCGAAACGGT-CAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
|| | | | |||| || || | ||| | ||| |||||||| | || || ||
Sbjct 1379145 TCGGGTACAATAGAAAATGTACAGGCCAAGATTCA-GGATAAGGAAGGAATTCCTCCTGA 1379087
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATT 31367
|||||| | || || || |||||||| || ||||||| | ||| ||| || || |
Sbjct 1379086 TCAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGATGCACTTTGTCTGACT 1379028
Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
| ||||||||||| || || ||||||||||| || | |||||
Sbjct 1379027 ACAACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 1378985
>seq377
Length=1354867
Score = 84.2 bits (92), Expect = 2e-11
Identities = 159/233 (68%), Gaps = 1/233 (0%)
Strand=Plus/Minus
Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246
||||| ||||| || ||||| ||||| || || ||||| || ||| || | || || ||
Sbjct 824634 TCAAA-ATGCAGATCTTCGTGAAGACCCTAACCGGCAAGACCATCCCCCTGGAGGTGGAG 824576
Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC 31306
|| |||| |||||| || || | || || || || ||| | || ||
Sbjct 824575 CCCAGTGACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCT 824516
Query 31307 GACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGAT 31366
||||||||| | || || || || ||||| ||| ||||||| ||| | |||
Sbjct 824515 GACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGAT 824456
Query 31367 TATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|||||||| || ||||| ||||| || || ||||| || |||||||| ||
Sbjct 824455 TATAACATCCAGAAAGAGTCGACCCTGCACCTGGTTCTGCACCTGAGGGGTGG 824403
>seq1
Length=12736304
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/202 (70%), Gaps = 3/202 (1%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || || || || || || || |||||| |||| ||||||||
Sbjct 12236889 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 12236830
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | |||| || || | || ||| |||||||| | || || ||
Sbjct 12236829 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCC-GAT 12236771
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
|||||| | || || || |||||||| || ||||||| | | | ||| || || ||
Sbjct 12236770 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGCACTTTGTCTGACTA 12236712
Query 31369 TAACATTCAAAAAGAATCGACT 31390
||||||||||| || || |||
Sbjct 12236711 CAACATTCAAAAGGAGTCTACT 12236690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445673284971120
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