Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq19 134 1e-26
seq878 87.8 1e-12
>seq19
Length=4596781
Score = 134 bits (148), Expect = 1e-26
Identities = 327/481 (68%), Gaps = 26/481 (5%)
Strand=Plus/Minus
Query 22453 TCTCACATACTGGCATTCTTTGCAATGGCAGATGGCATTGTAGGCGACAACCTTGTGT-G 22511
|| ||| | ||||| ||||||| | |||||||| ||| || ||| | ||| |
Sbjct 3965538 TCCCACGTTCTGGCTTTCTTTGTGCCGAGTGATGGCATAGTAAATGAAAACTTGGTGGAG 3965479
Query 22512 CAATTTCGCAAAAGAACTTGACTATATTCCAGAAGCCAGAGCTTTCTATGGGTTTCAGGT 22571
| ||| || || ||| || | ||| |||||||| | ||||||||| || || |
Sbjct 3965478 CGGTTTAGCCAA-GAAGTTCAG---ATTACAGAAGCCCGCTGTTTCTATGGCTTCCAAAT 3965423
Query 22572 GGCAATGGAAAATATACATGCTGAAATGTATACTCAGCTGATTATCACATTAGTAGCTAA 22631
|| |||||||| || ||| |||| ||||| | || || ||| || | || |||
Sbjct 3965422 TGCCATGGAAAACATCCATTCTGAGATGTACAGTCTCCTCATTGACAGTTACGT---TAA 3965366
Query 22632 AGA----GAATCAAGCCGCATTGTTTTCAGCAGC-TGAAGATA-TGCCATGTGTTAAAGC 22685
||| ||| ||| || | |||| | | | ||| | |||| ||||| ||||
Sbjct 3965365 AGATTCCGAAGAAAGGGAATTTCTCTTCAACGCCCTCCAGACAATGCCTTGTGT-AAAG- 3965308
Query 22686 CAAGGCACAGTGGGCTGCACAATGG-CTGAATGCCACACATAAGT---CTATCGCAACAC 22741
|||||| | ||||| || ||| ||| || ||| | | | ||| | | ||
Sbjct 3965307 -AAGGCAGACTGGGCCTTGCATTGGACTG---GCGACAAAGAGGCTACCTACGGGGA-AC 3965253
Query 22742 GTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATAT 22801
| | ||| |||||| ||||| ||||| || | |||||||| || |||||| | ||||
Sbjct 3965252 GGGTTGTGGACTTTGCTGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCGACGATAT 3965193
Query 22802 TCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCC 22861
||||||| |||||||| || ||||| || || |||||||||| || | ||||||
Sbjct 3965192 TCTGGCTCAAGAAACGCGACCTGATGCC-TGGCTGACGTTTTCCAATGAACTTATTAGCA 3965134
Query 22862 GTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAAC 22921
| || || ||| |||||||||||||||| || || |||| | ||| ||| ||||||
Sbjct 3965133 GAGATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCAAACAACTGGTCCACAAAC 3965074
Query 22922 C 22922
|
Sbjct 3965073 C 3965073
>seq878
Length=898115
Score = 87.8 bits (96), Expect = 1e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807
|||| ||||| ||||| ||||| || | |||||||| || |||||| | ||||||||||
Sbjct 679032 TGGCTTTTGCTGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCGTCAATATTCTGGC 679091
Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867
| |||||||| || ||||| || | |||||||||| || | |||||| | || |
Sbjct 679092 TCAAGAAACGCGGCCTGATGCCTGGCCTCACGTTTTCCAATGAACTTATTAGCAGAGATG 679151
Query 22868 A 22868
|
Sbjct 679152 A 679152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356161047572533
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |