Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03- 29] 16,711 sequences; 3,156,902,762 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq293 89.7 4e-13 >seq293 Length=1771812 Score = 89.7 bits (98), Expect = 4e-13 Identities = 104/139 (75%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| ||||||||||| | ||| | |||| ||||||||| ||||| || ||| Sbjct 534100 CCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTAGTCAGAC 534041 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || ||| | || |||| ||| ||||| ||||| ||||||| ||| ||||| | || Sbjct 534040 AGAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCAGGAGGA 533981 Query 43003 ACACCTTCTTTTTCGCTGA 43021 | ||||| || || |||| Sbjct 533980 ATTCCTTCCTTATC-CTGA 533963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381291928241238