Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03- 29] 16,711 sequences; 3,156,902,762 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq377 84.2 1e-11 >seq377 Length=1354867 Score = 84.2 bits (92), Expect = 1e-11 Identities = 140/201 (70%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232 || |||||||| || |||||||||||||| | | || | || |||| ||||| | Sbjct 824205 GTTGACTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCTTCCATCTGCTTGCTG 824264 Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTCGCTAATCGCCTGT 33289 ||| || | | |||||||| | ||| ||||| ||||| || | || ||||| Sbjct 824265 GCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATATTGGATATTCGCC--- 824321 Query 33290 TTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGA 33349 || || ||| ||| ||||| |||| | || ||||| || || || || || || || Sbjct 824322 TTCACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTTAGG 824381 Query 33350 GTTTTTACGAAAATTTGCATG 33370 || || ||||| || |||||| Sbjct 824382 GTCTTCACGAAGATCTGCATG 824402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318712676060478