Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq674 102 7e-17
>seq674
Length=1058379
Score = 102 bits (112), Expect = 7e-17
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 13173 CTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTT 13232
|||||||||| || || || || || ||||| || || || ||||| || |||| ||| |
Sbjct 558250 CTTCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCGGGCATGAGACCTCTTTTCT 558191
Query 13233 TAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACG 13292
| | ||| |||||||||||||| || ||||| || || || ||||| || || ||||| |
Sbjct 558190 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATCCCTTCTACAGCAGCAAAAG 558131
Query 13293 CTATCAACCTTTCACC 13308
| | || ||||| ||
Sbjct 558130 CCACCACTCTTTCCCC 558115
Score = 84.2 bits (92), Expect = 2e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 12980 AATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAAT 13039
||||||||||| |||||||| || ||||||||||| ||| |||| |||||||| || |
Sbjct 564745 AATCTGTCAGCTACAAACTCAATATACTGTTTCATCAAAACACAATTCATTCCAATGAGG 564686
Query 13040 TTTACAGGCATAGCTTCTGTTAAAAA 13065
|| |||| ||||||||||||||
Sbjct 564685 CCAACTGGCAAGGCTTCTGTTAAAAA 564660
Score = 82.4 bits (90), Expect = 7e-11
Identities = 66/80 (83%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 12862 TTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTC 12921
|||||| || ||||| ||| ||||| || |||||||| |||||||| ||||| || ||
Sbjct 573945 TTGATACTCTGCAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTCTC 573886
Query 12922 CATAAAATCGAAAGGATTTT 12941
||||||||| || |||||||
Sbjct 573885 CATAAAATCAAAGGGATTTT 573866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430894623834822
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |