Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03- 29] 16,711 sequences; 3,156,902,762 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq512 118 9e-22 >seq512 Length=1279947 Score = 118 bits (130), Expect = 9e-22 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| |||| |||||||| || |||||||| || ||||| ||||| ||||| Sbjct 116026 GGTTGCCAAGCCTTGTCGGAGATGATCCAATTCTACCTGGAGGAGGTGATGCCCCAGGCT 116085 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || || |||| || |||| || |||||||| || |||||||| |||||||||||||| Sbjct 116086 GAGAACCACGACCCAAACATCAAGGAACACGTGAACTCCCTGGGGGAAAAGCTGAAGACC 116145 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 | || || | ||||| || || Sbjct 116146 CTCAGGCTGAGGCTGCGGCGTTG 116168 Score = 89.7 bits (98), Expect = 4e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 127379 AGCTTCAGGAAAGAGGCGTGTACAAGGCCATGAGTGAGTTTGACATATTCATCAACTACA 127438 |||| || || ||||| || ||||| |||||||||||||||||||| ||||||||||||| Sbjct 118321 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 118380 Query 127439 TCGAGACTTACATG 127452 | || || |||||| Sbjct 118381 TAGAAACCTACATG 118394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429966812836232