Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_006146.1
Length=171096
Score E
Sequences producing significant alignments: (Bits) Value
seq512 129 6e-25
>seq512
Length=1279947
Score = 129 bits (142), Expect = 6e-25
Identities = 112/139 (81%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199
|||| |||||||| || || ||| |||| || |||||||| || ||||||||||| || |
Sbjct 116015 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAATTCTACCTGGAGGAGGTGA 116074
Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259
|||| |||||||| || || ||||| || ||| || ||||||||||| ||||| || |
Sbjct 116075 TGCCCCAGGCTGAGAACCACGACCCAAACATCAAGGAACACGTGAACTCCCTGGGGGAAA 116134
Query 10260 ATCTAAAGACCCTAAGGCT 10278
| || |||||||| |||||
Sbjct 116135 AGCTGAAGACCCTCAGGCT 116153
Score = 91.5 bits (100), Expect = 2e-13
Identities = 71/85 (84%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418
|||| || || | ||| |||||||||||||||||||| |||||||| || || ||||| |
Sbjct 118321 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 118380
Query 10419 TAGAAGCATACATGACCATGAAAAT 10443
||||| | |||||||| ||||| ||
Sbjct 118381 TAGAAACCTACATGACAATGAAGAT 118405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547264859327360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |