Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq3675 125 1e-24
seq795 123 4e-24
seq697 123 4e-24
>seq3675
Length=188488
Score = 125 bits (138), Expect = 1e-24
Identities = 173/242 (71%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517
|||| ||||||||||| ||||||||||| || ||||| || || || || ||||| ||||
Sbjct 129138 GAGACAACATCCAAGGCATCACCAAGCCGGCAATCCGGCGCCTCGCCCGGCGTGGAGGAG 129079
Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577
||||||| |||| || | | || || |||| ||| | ||| | ||| | || ||
Sbjct 129078 TCAAGCGCATCTCCGGCCTCATTTACGAGGAGACTCGGGGTGTGCTAAAGGTGTTTCTAG 129019
Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637
| | ||| || | || || || ||| || |||||||| || || ||||| ||||||
Sbjct 129018 AAAACGTCATTCGGGACGCAGTCACCTACACTGAGCACGCCAAGCGCAAGACGGTCACCG 128959
Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697
||||||| | || ||||| | || || || || || | | ||||| || ||| | |
Sbjct 128958 CCATGGACGTGGTGTATGCCCTCAAGCGACAGGGACGCACCCTGTATGGCTTCGGAGGCT 128899
Query 16698 AA 16699
||
Sbjct 128898 AA 128897
>seq795
Length=1132128
Score = 123 bits (136), Expect = 4e-24
Identities = 173/243 (71%), Gaps = 0/243 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 754020 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 753961
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || ||||| || || || || |||||||| |||| || | |||| || ||||
Sbjct 753960 CCGGCGGCTGGCCCGGCGCGGCGGCGTCAAGCGCATCTCCGGCCTCATCTACGAGGAGAC 753901
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| | ||||| ||| ||| |||| || || || ||| || ||
Sbjct 753900 CCGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTGATCCGGGACGCGGTCACCTACACGGA 753841
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| ||||| ||||||| | ||||| || | || || || ||
Sbjct 753840 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 753781
Query 16672 CCG 16674
|||
Sbjct 753780 CCG 753778
>seq697
Length=990230
Score = 123 bits (136), Expect = 4e-24
Identities = 173/243 (71%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 142038 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 142097
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || ||||| || || || || |||||||| |||| || | |||| || ||||
Sbjct 142098 CCGGCGGCTGGCCCGGCGCGGCGGCGTCAAGCGCATCTCCGGCCTCATCTACGAGGAGAC 142157
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| | ||||| ||| ||| |||| || || || ||| || ||
Sbjct 142158 CCGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 142217
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| ||||| ||||||| | ||||| || | || || || ||
Sbjct 142218 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 142277
Query 16672 CCG 16674
|||
Sbjct 142278 CCG 142280
Score = 123 bits (136), Expect = 4e-24
Identities = 173/243 (71%), Gaps = 0/243 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 290256 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 290197
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || ||||| || || || || |||||||| |||| || | |||| || ||||
Sbjct 290196 CCGGCGGCTGGCCCGGCGCGGCGGCGTCAAGCGCATCTCCGGCCTCATCTACGAGGAGAC 290137
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| | ||||| ||| ||| |||| || || || ||| || ||
Sbjct 290136 CCGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 290077
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| ||||| ||||||| | ||||| || | || || || ||
Sbjct 290076 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 290017
Query 16672 CCG 16674
|||
Sbjct 290016 CCG 290014
Score = 123 bits (136), Expect = 4e-24
Identities = 173/243 (71%), Gaps = 0/243 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 322296 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 322237
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || ||||| || || || || |||||||| |||| || | |||| || ||||
Sbjct 322236 CCGGCGGCTGGCCCGGCGCGGCGGCGTCAAGCGCATCTCCGGCCTCATCTACGAGGAGAC 322177
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| | ||||| ||| ||| |||| || || || ||| || ||
Sbjct 322176 CCGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 322117
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| ||||| ||||||| | ||||| || | || || || ||
Sbjct 322116 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 322057
Query 16672 CCG 16674
|||
Sbjct 322056 CCG 322054
Score = 123 bits (136), Expect = 4e-24
Identities = 173/243 (71%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 350327 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 350386
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || ||||| || || || || |||||||| |||| || | |||| || ||||
Sbjct 350387 CCGGCGGCTGGCCCGGCGCGGCGGCGTCAAGCGCATCTCCGGCCTCATCTACGAGGAGAC 350446
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| | ||||| ||| ||| |||| || || || ||| || ||
Sbjct 350447 CCGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 350506
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| ||||| ||||||| | ||||| || | || || || ||
Sbjct 350507 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 350566
Query 16672 CCG 16674
|||
Sbjct 350567 CCG 350569
Score = 123 bits (136), Expect = 4e-24
Identities = 173/243 (71%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 373023 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 373082
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || ||||| || || || || |||||||| |||| || | |||| || ||||
Sbjct 373083 CCGGCGGCTGGCCCGGCGCGGCGGCGTCAAGCGCATCTCCGGCCTCATCTACGAGGAGAC 373142
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| | ||||| ||| ||| |||| || || || ||| || ||
Sbjct 373143 CCGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 373202
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| ||||| ||||||| | ||||| || | || || || ||
Sbjct 373203 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 373262
Query 16672 CCG 16674
|||
Sbjct 373263 CCG 373265
Score = 123 bits (136), Expect = 4e-24
Identities = 173/243 (71%), Gaps = 0/243 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 409439 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 409380
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || ||||| || || || || |||||||| |||| || | |||| || ||||
Sbjct 409379 CCGGCGGCTGGCCCGGCGCGGCGGCGTCAAGCGCATCTCCGGCCTCATCTACGAGGAGAC 409320
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| | ||||| ||| ||| |||| || || || ||| || ||
Sbjct 409319 CCGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTGATCCGGGACGCGGTCACCTACACGGA 409260
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| ||||| ||||||| | ||||| || | || || || ||
Sbjct 409259 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 409200
Query 16672 CCG 16674
|||
Sbjct 409199 CCG 409197
Score = 123 bits (136), Expect = 4e-24
Identities = 173/243 (71%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||| ||||| || |||| || || || |||||||| || ||||||||||| || ||
Sbjct 820654 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 820713
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| || ||||| || || || || |||||||| |||| || | |||| || ||||
Sbjct 820714 CCGGCGGCTGGCCCGGCGCGGCGGCGTCAAGCGCATCTCCGGCCTCATCTACGAGGAGAC 820773
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | || | ||| | ||||| ||| ||| |||| || || || ||| || ||
Sbjct 820774 CCGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 820833
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| ||||| ||||||| | ||||| || | || || || ||
Sbjct 820834 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 820893
Query 16672 CCG 16674
|||
Sbjct 820894 CCG 820896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79059921015723
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |