Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03- 29] 16,711 sequences; 3,156,902,762 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3675 125 1e-24 seq795 123 4e-24 seq697 123 4e-24 >seq3675 Length=188488 Score = 125 bits (138), Expect = 1e-24 Identities = 173/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||| ||||||||||| || ||||| || || || || ||||| |||| Sbjct 129138 GAGACAACATCCAAGGCATCACCAAGCCGGCAATCCGGCGCCTCGCCCGGCGTGGAGGAG 129079 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 ||||||| |||| || | | || || |||| ||| | ||| | ||| | || || Sbjct 129078 TCAAGCGCATCTCCGGCCTCATTTACGAGGAGACTCGGGGTGTGCTAAAGGTGTTTCTAG 129019 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 | | ||| || | || || || ||| || |||||||| || || ||||| |||||| Sbjct 129018 AAAACGTCATTCGGGACGCAGTCACCTACACTGAGCACGCCAAGCGCAAGACGGTCACCG 128959 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 ||||||| | || ||||| | || || || || || | | ||||| || ||| | | Sbjct 128958 CCATGGACGTGGTGTATGCCCTCAAGCGACAGGGACGCACCCTGTATGGCTTCGGAGGCT 128899 Query 16698 AA 16699 || Sbjct 128898 AA 128897 >seq795 Length=1132128 Score = 123 bits (136), Expect = 4e-24 Identities = 173/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| || || || |||||||| || ||||||||||| || || Sbjct 754020 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 753961 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| || || || || |||||||| |||| || | |||| || |||| Sbjct 753960 CCGGCGGCTGGCCCGGCGCGGCGGCGTCAAGCGCATCTCCGGCCTCATCTACGAGGAGAC 753901 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| | ||||| ||| ||| |||| || || || ||| || || Sbjct 753900 CCGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTGATCCGGGACGCGGTCACCTACACGGA 753841 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||| ||||||| | ||||| || | || || || || Sbjct 753840 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 753781 Query 16672 CCG 16674 ||| Sbjct 753780 CCG 753778 >seq697 Length=990230 Score = 123 bits (136), Expect = 4e-24 Identities = 173/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| || || || |||||||| || ||||||||||| || || Sbjct 142038 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 142097 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| || || || || |||||||| |||| || | |||| || |||| Sbjct 142098 CCGGCGGCTGGCCCGGCGCGGCGGCGTCAAGCGCATCTCCGGCCTCATCTACGAGGAGAC 142157 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| | ||||| ||| ||| |||| || || || ||| || || Sbjct 142158 CCGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 142217 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||| ||||||| | ||||| || | || || || || Sbjct 142218 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 142277 Query 16672 CCG 16674 ||| Sbjct 142278 CCG 142280 Score = 123 bits (136), Expect = 4e-24 Identities = 173/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| || || || |||||||| || ||||||||||| || || Sbjct 290256 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 290197 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| || || || || |||||||| |||| || | |||| || |||| Sbjct 290196 CCGGCGGCTGGCCCGGCGCGGCGGCGTCAAGCGCATCTCCGGCCTCATCTACGAGGAGAC 290137 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| | ||||| ||| ||| |||| || || || ||| || || Sbjct 290136 CCGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 290077 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||| ||||||| | ||||| || | || || || || Sbjct 290076 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 290017 Query 16672 CCG 16674 ||| Sbjct 290016 CCG 290014 Score = 123 bits (136), Expect = 4e-24 Identities = 173/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| || || || |||||||| || ||||||||||| || || Sbjct 322296 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 322237 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| || || || || |||||||| |||| || | |||| || |||| Sbjct 322236 CCGGCGGCTGGCCCGGCGCGGCGGCGTCAAGCGCATCTCCGGCCTCATCTACGAGGAGAC 322177 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| | ||||| ||| ||| |||| || || || ||| || || Sbjct 322176 CCGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 322117 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||| ||||||| | ||||| || | || || || || Sbjct 322116 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 322057 Query 16672 CCG 16674 ||| Sbjct 322056 CCG 322054 Score = 123 bits (136), Expect = 4e-24 Identities = 173/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| || || || |||||||| || ||||||||||| || || Sbjct 350327 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 350386 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| || || || || |||||||| |||| || | |||| || |||| Sbjct 350387 CCGGCGGCTGGCCCGGCGCGGCGGCGTCAAGCGCATCTCCGGCCTCATCTACGAGGAGAC 350446 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| | ||||| ||| ||| |||| || || || ||| || || Sbjct 350447 CCGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 350506 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||| ||||||| | ||||| || | || || || || Sbjct 350507 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 350566 Query 16672 CCG 16674 ||| Sbjct 350567 CCG 350569 Score = 123 bits (136), Expect = 4e-24 Identities = 173/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| || || || |||||||| || ||||||||||| || || Sbjct 373023 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 373082 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| || || || || |||||||| |||| || | |||| || |||| Sbjct 373083 CCGGCGGCTGGCCCGGCGCGGCGGCGTCAAGCGCATCTCCGGCCTCATCTACGAGGAGAC 373142 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| | ||||| ||| ||| |||| || || || ||| || || Sbjct 373143 CCGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 373202 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||| ||||||| | ||||| || | || || || || Sbjct 373203 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 373262 Query 16672 CCG 16674 ||| Sbjct 373263 CCG 373265 Score = 123 bits (136), Expect = 4e-24 Identities = 173/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| || || || |||||||| || ||||||||||| || || Sbjct 409439 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 409380 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| || || || || |||||||| |||| || | |||| || |||| Sbjct 409379 CCGGCGGCTGGCCCGGCGCGGCGGCGTCAAGCGCATCTCCGGCCTCATCTACGAGGAGAC 409320 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| | ||||| ||| ||| |||| || || || ||| || || Sbjct 409319 CCGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTGATCCGGGACGCGGTCACCTACACGGA 409260 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||| ||||||| | ||||| || | || || || || Sbjct 409259 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 409200 Query 16672 CCG 16674 ||| Sbjct 409199 CCG 409197 Score = 123 bits (136), Expect = 4e-24 Identities = 173/243 (71%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| || || || |||||||| || ||||||||||| || || Sbjct 820654 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCCGCCAT 820713 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| || || || || |||||||| |||| || | |||| || |||| Sbjct 820714 CCGGCGGCTGGCCCGGCGCGGCGGCGTCAAGCGCATCTCCGGCCTCATCTACGAGGAGAC 820773 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | ||| | ||||| ||| ||| |||| || || || ||| || || Sbjct 820774 CCGCGGGGTGCTCAAGGTGTTCCTGGAGAACGTGATCCGGGACGCCGTCACCTACACGGA 820833 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||| ||||||| | ||||| || | || || || || Sbjct 820834 GCACGCCAAGCGCAAGACGGTCACGGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGG 820893 Query 16672 CCG 16674 ||| Sbjct 820894 CCG 820896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79059921015723