Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03- 29] 16,711 sequences; 3,156,902,762 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1818 86.0 5e-12 seq975 86.0 5e-12 >seq1818 Length=636242 Score = 86.0 bits (94), Expect = 5e-12 Identities = 151/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||||||||| | || || ||||| | || || || | || ||| |||| || || | Sbjct 433231 CAAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACC 433172 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | || || || || | || || |||||| || || ||||| || ||||| || Sbjct 433171 CTCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGA 433112 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||| ||||||||||| | | |||||| |||| ||||||| | | | || || Sbjct 433111 TCAGCAGAGACTGATCTTTGCTGGCAAGTAACTGGAAGATGGACGCACTTTGTCTGACTA 433052 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGA 24206 ||||||||||| || ||||| ||||| | ||||| ||| Sbjct 433051 CAACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGA 433012 >seq975 Length=833997 Score = 86.0 bits (94), Expect = 5e-12 Identities = 151/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||||||||| | || || ||||| | || || || | || ||| |||| || || | Sbjct 558718 CAAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACC 558659 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 || || || || | || || |||||| || || ||||| || ||||| || Sbjct 558658 GTCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGA 558599 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||| ||||||||||| | | ||||||||||| ||||||| | | | || || Sbjct 558598 TCAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTA 558539 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGA 24206 ||||||||||| || ||||| ||||| | ||||| ||| Sbjct 558538 CAACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGA 558499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429848436950205