Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq1818 86.0 5e-12
seq975 86.0 5e-12
>seq1818
Length=636242
Score = 86.0 bits (94), Expect = 5e-12
Identities = 151/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
||||||||| | || || ||||| | || || || | || ||| |||| || || |
Sbjct 433231 CAAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACC 433172
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
| || || || || | || || |||||| || || ||||| || ||||| ||
Sbjct 433171 CTCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGA 433112
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
||| ||||||||||| | | |||||| |||| ||||||| | | | || ||
Sbjct 433111 TCAGCAGAGACTGATCTTTGCTGGCAAGTAACTGGAAGATGGACGCACTTTGTCTGACTA 433052
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGA 24206
||||||||||| || ||||| ||||| | ||||| |||
Sbjct 433051 CAACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGA 433012
>seq975
Length=833997
Score = 86.0 bits (94), Expect = 5e-12
Identities = 151/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
||||||||| | || || ||||| | || || || | || ||| |||| || || |
Sbjct 558718 CAAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACC 558659
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
|| || || || | || || |||||| || || ||||| || ||||| ||
Sbjct 558658 GTCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGA 558599
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
||| ||||||||||| | | ||||||||||| ||||||| | | | || ||
Sbjct 558598 TCAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTA 558539
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGA 24206
||||||||||| || ||||| ||||| | ||||| |||
Sbjct 558538 CAACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGA 558499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429848436950205
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |