Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq1641 118 7e-22
seq975 114 9e-21
seq630 113 3e-20
seq9145 111 1e-19
seq2520 111 1e-19
seq1818 105 4e-18
seq1 100 2e-16
seq2797 86.0 4e-12
seq371 86.0 4e-12
seq293 86.0 4e-12
seq182 84.2 1e-11
>seq1641
Length=668455
Score = 118 bits (130), Expect = 7e-22
Identities = 83/95 (87%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||
Sbjct 354714 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 354655
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| |||||||| ||| |||||||||||||||
Sbjct 354654 TCATCCATTCATGCGGGTCGCTAATTAGATGACGA 354620
>seq975
Length=833997
Score = 114 bits (126), Expect = 9e-21
Identities = 157/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | ||||||||| |||||||||||| ||||| ||||||||| ||| | ||
Sbjct 558502 CAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 558561
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || || | || ||||| | || | ||||| || ||
Sbjct 558562 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 558621
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC-TTTCAACTTCTAATGTAATAG 38283
| ||| || ||| ||||| | | ||||| | || |||||| || | || || |
Sbjct 558622 CTGAATCTTGGCCTTTACATTTTCTATTGTATC-CGACGGTTCAACCTCGAGGGTGATGG 558680
Query 38284 TTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
| || ||||| | |||||||||||| |||||||| ||
Sbjct 558681 TCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 558717
>seq630
Length=1120681
Score = 113 bits (124), Expect = 3e-20
Identities = 82/95 (86%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||| | || |||||||| ||||| || ||||||||
Sbjct 870512 AAGCCCGTTCCCTTGGCTGTGGTTCCTCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 870571
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||| ||||||||||||||||||
Sbjct 870572 TCATCCATTCATGCGCATCACTAATTAGATGACGA 870606
>seq9145
Length=4041
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | |||||||||| | |||||||||| ||||| ||||||||| |||| | ||
Sbjct 285 CAACACAAGATGAAGAGTGGACGCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATC 344
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || || | || ||||| | || | ||||| || |
Sbjct 345 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATT 404
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| ||| || ||| | ||| | | |||||| |||||| || | || || ||
Sbjct 405 CTGAATCTTGGCCTTTATATTTTCTATTGTATCTGAGGGTTCAACCTCGAGAGTGATGGT 464
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| ||||| | |||||||||||| |||||||| ||
Sbjct 465 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCTT 500
>seq2520
Length=369870
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | |||||||||| | |||||||||| ||||| ||||||||| |||| | ||
Sbjct 184203 CAACACAAGATGAAGAGTGGACGCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATC 184144
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || || | || ||||| | || | ||||| || |
Sbjct 184143 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATT 184084
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| ||| || ||| | ||| | | |||||| |||||| || | || || ||
Sbjct 184083 CTGAATCTTGGCCTTTATATTTTCTATTGTATCTGAGGGTTCAACCTCGAGAGTGATGGT 184024
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| ||||| | |||||||||||| |||||||| ||
Sbjct 184023 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCTT 183988
>seq1818
Length=636242
Score = 105 bits (116), Expect = 4e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | ||||||||| |||||||||||| ||||| ||||||||| ||| | ||
Sbjct 433015 CAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 433074
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | || || || ||||| || || | || ||||| | || | ||||| || ||
Sbjct 433075 TTCCAGTTACTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 433134
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| ||| || ||| ||||| | | ||||| |||||| || | || || ||
Sbjct 433135 CTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 433194
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| ||||| | |||||||||||| |||||||| ||
Sbjct 433195 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 433230
>seq1
Length=12736304
Score = 100 bits (110), Expect = 2e-16
Identities = 140/195 (72%), Gaps = 1/195 (1%)
Strand=Plus/Plus
Query 38126 CTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAA 38185
|||||||||||| ||||| ||||||||| ||| | || || | ||| || || |||||
Sbjct 12236696 CTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAA 12236755
Query 38186 TATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245
|| || | || |||||||| || | ||||| || ||| ||| || ||| |||||
Sbjct 12236756 GATCAGTCTCTGCTGATCGGA-GGAATTCCTTCCTTATCCTGAATCTTGGCCTTTACATT 12236814
Query 38246 CTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCAC 38305
| | ||||| |||||| || | || || || || ||||| | |||||||||
Sbjct 12236815 TTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCAC 12236874
Query 38306 GAATATCTGCATGTT 38320
||| |||||||| ||
Sbjct 12236875 GAAAATCTGCATTTT 12236889
>seq2797
Length=342856
Score = 86.0 bits (94), Expect = 4e-12
Identities = 76/95 (80%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|| ||| |||||| |||||||||||| || |||||||| ||||| || | ||| ||
Sbjct 204314 AAACCCATTCCCTGGGCTGTGGTTTCACTGGATAGTAGGTAGGGATAGTGGGACTCTTGT 204373
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||| | ||||||||||||||||| ||
Sbjct 204374 TCATCCATTCATACACGTCACTAATTAGATGATGA 204408
>seq371
Length=1453275
Score = 86.0 bits (94), Expect = 4e-12
Identities = 149/216 (69%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | |||||||||| |||||||||||| |||| ||| ||||| || |||
Sbjct 449780 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACACAAAGTTTGTCTGTC 449721
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || | ||||| || | || ||||| | || | ||||| || ||
Sbjct 449720 TTCCAGTTGCTTGCCAGTGAATATCAGTC--TGCTGATCAGGAGGAATTCCTTCCTTATC 449663
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| || || ||| ||||| | || ||| || |||||| || | || || ||
Sbjct 449662 CTGGATCTTGGCCTTTACATTTTCTACTGTACCTGAGGATTCAACCTCGAGAGTGATGGT 449603
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| ||| | | ||||||||| || |||||||| ||
Sbjct 449602 CTTCCCCATAAGGGTTTTCACAAAAATCTGCATCTT 449567
>seq293
Length=1771812
Score = 86.0 bits (94), Expect = 4e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 38106 AACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCG 38165
||||| | |||||||||| |||||||||| | ||||| ||||||| | ||| | ||
Sbjct 534085 AACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTAGTCAGACAGAGTGCGTCCATCT 534026
Query 38166 TCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCC 38225
|| | ||| || || ||||| || | | || ||||| | || | ||||| || |||
Sbjct 534025 TCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTATCC 533966
Query 38226 ATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTT 38285
||| || ||| ||||| | | ||||| |||| | || | || || ||
Sbjct 533965 TGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTCGAGAGTGATGGTC 533906
Query 38286 TTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| ||| | | ||||||||||| |||||||| ||
Sbjct 533905 TTCCCCATAAGAGTTTTCACGAAAATCTGCATCTT 533871
>seq182
Length=1985155
Score = 84.2 bits (92), Expect = 1e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | ||||||||| |||||||||||| ||||| ||||||||| | | | ||
Sbjct 1378990 CAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCATCCATC 1379049
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || || | || ||||| | || | ||||| || ||
Sbjct 1379050 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 1379109
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| ||| || || ||||| | | ||| | |||| | || | | || ||
Sbjct 1379110 CTGAATCTTGGCCTGTACATTTTCTATTGTACCCGAGGGTTCAGCCTCAAGGATGATGGT 1379169
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| ||||| | |||||||| ||| |||||||| ||
Sbjct 1379170 CTTCCCCGTAAGGGTTTTCAGGAAAATCTGCATCTT 1379205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334878982873841
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