Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq2936 95.1 2e-14
seq2277 91.5 3e-13
seq2484 89.7 1e-12
seq1998 89.7 1e-12
seq1595 89.7 1e-12
seq697 89.7 1e-12
seq113 86.0 1e-11
>seq2936
Length=334043
Score = 95.1 bits (104), Expect = 2e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
|||||||||||||||||||| |||||| ||||||||||||||| ||||| |||||||||
Sbjct 309919 GTCTCTGTGGCGCAATGGACGAGCGCGCTGGACTTCTAATCCAGAGGTTCCGGGTTCGAG 309860
Query 142112 CCCCGCCAGAGA 142123
|||| ||||||
Sbjct 309859 TCCCGGCAGAGA 309848
>seq2277
Length=480552
Score = 91.5 bits (100), Expect = 3e-13
Identities = 70/82 (85%), Gaps = 2/82 (2%)
Strand=Plus/Minus
Query 142494 TGGTGAGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGT 142553
||||||| |||||| |||||||||||||||||| ||||||||||||| ||||||
Sbjct 436025 TGGTGAGC--GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGT 435968
Query 142554 GGGTTCGAGCCCCACATCGGGC 142575
||||||||||||||| | ||||
Sbjct 435967 GGGTTCGAGCCCCACGTTGGGC 435946
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 426263 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 426322
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 426323 CCCACGTTGGGC 426334
>seq2484
Length=411614
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 314127 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 314068
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 314067 CCCACGTTGGGC 314056
>seq1998
Length=509632
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||| ||||
Sbjct 257634 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTTGAGC 257575
Query 142564 CCCACATCGGGC 142575
||||||| ||||
Sbjct 257574 CCCACATTGGGC 257563
>seq1595
Length=576656
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 337429 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 337370
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 337369 CCCACGTTGGGC 337358
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 346450 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 346391
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 346390 CCCACGTTGGGC 346379
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||| || |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 363123 GCCTGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 363064
Query 142564 CCCACATCGGGC 142575
||||| ||||||
Sbjct 363063 CCCACGTCGGGC 363052
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 366372 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 366431
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 366432 CCCACGTTGGGC 366443
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 370918 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 370977
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 370978 CCCACGTTGGGC 370989
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| |||| |||||||| ||||||||||||||||
Sbjct 358910 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACCCTTAATCTCAGGGTCGTGGGTTCGAGC 358851
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 358850 CCCACGTTGGGC 358839
>seq697
Length=990230
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 542025 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 542084
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 542085 CCCACGTTGGGC 542096
>seq113
Length=2566794
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| ||||||||||||||||| | ||||||||||||| |||||||||| |||||
Sbjct 807706 GCCCGGCCAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCAGGGTCGTGGGTGCGAGC 807647
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 807646 CCCACGTTGGGC 807635
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027616730183951
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |