Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq19 122 2e-22
seq674 87.8 3e-12
>seq19
Length=4596781
Score = 122 bits (134), Expect = 2e-22
Identities = 352/531 (66%), Gaps = 23/531 (4%)
Strand=Plus/Minus
Query 42443 TGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAAGAGGTGCAG--TACTTT 42500
||| |||||||| ||||| ||| ||| |||| | |||| || ||| |||
Sbjct 3965509 TGATGGCATAGTAAATGAAAACTTGGTGGAGCGGTTTAGCCAAGAAGTTCAGATTACA-- 3965452
Query 42501 GAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTAC 42560
|| || ||||| ||||| |||||||| || ||||| || ||| | || |||||| |||||
Sbjct 3965451 GAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAACATCCATTCTGAGATGTAC 3965392
Query 42561 GCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAG 42617
| || |||| ||| ||| | ||| ||| || | | || |||||
Sbjct 3965391 ---AGTCTCCTCATTGACAGTTACGTTAAAGATTCCGAAGAAAGGGAATTTCTCTTCAAC 3965335
Query 42618 GCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAG 42677
||| | |||| ||||| || | |||||| || |||||||| | | |||| | |
Sbjct 3965334 GCCCTCCAGACAATGCCTTGTGTAAAGAAG---GCAGACTGGGCCTTGCATTGGACTG-G 3965279
Query 42678 AGTCCC-GACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTT 42736
| | || || || | ||| || || | || | |||| | || || || || |||||
Sbjct 3965278 CGACAAAGAGGCTACCTACGGGGAACGGGTTGTGGACTTTGCTGCTGTGGAAGGAATCTT 3965219
Query 42737 CTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC--GATGCCCGGA 42794
||| || || | || || | || |||||||||||| | | | | | |||||| ||
Sbjct 3965218 CTTTTCTGGTTCTTTTGCGACGATATTCTGGCTCAAGAA--ACGCGACCTGATGCCTGG- 3965162
Query 42795 CTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGC 42854
|| || || || || ||||| || ||||| || ||||| | || | ||||||||||||
Sbjct 3965161 CTGACGTTTTCCAATGAACTTATTAGCAGAGATGAGGGTTTACACTGTGACTTTGCCTGC 3965102
Query 42855 CTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATC 42914
|| ||||| | || || ||||| || || ||| || | || || || ||
Sbjct 3965101 CTGATGTTC---AAACAACTGGTCCACAAACCTTCCAAGCAGAGAGTGAAGGAAATAATT 3965045
Query 42915 ACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTG 42965
| | ||||| ||| ||| ||| |||||||||| || | |||| |||
Sbjct 3965044 ATTAATGCCGTTCGGATAGAGCAGGGGTTCCTCACGGAGACCTTGCCTGTG 3964994
>seq674
Length=1058379
Score = 87.8 bits (96), Expect = 3e-12
Identities = 96/125 (77%), Gaps = 2/125 (2%)
Strand=Plus/Plus
Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765
|||| || ||| | || || || || || ||||||||||| | || || | || ||||
Sbjct 558125 TGGTGGCTTTTGCTGCTGTAGAAGGGATTTTCTTCTCGGGATCTTTTGCTGCTATATTCT 558184
Query 42766 GGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824
|||| ||| | | |||| || |||||||||||||| || || || ||||||||||||||
Sbjct 558185 GGCTAAAGAAAAGAGGTCTC-ATGCCCGGACTCACGTTTTCCAATGAACTCATCAGCAGA 558243
Query 42825 GACGA 42829
|| ||
Sbjct 558244 GATGA 558248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944141939345360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |