Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_009334.1
Length=172764
Score E
Sequences producing significant alignments: (Bits) Value
seq512 123 3e-23
>seq512
Length=1279947
Score = 123 bits (136), Expect = 3e-23
Identities = 116/148 (78%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 9861 AGGGCTACCTTGGATGCCAGGCCCTGTCAGAAATGATCCAATTCTACCTGGAGGAAGTCA 9920
|||| ||||| || ||||| ||| |||| || ||||||||||||||||||||||| || |
Sbjct 116015 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAATTCTACCTGGAGGAGGTGA 116074
Query 9921 TGCCACAGGCTGAAAACCAGGACCCTGAAGCCAAAGACCATGTAAATTCTTTGGGTGAAA 9980
|||| |||||||| ||||| ||||| | ||| || || || || || |||| ||||
Sbjct 116075 TGCCCCAGGCTGAGAACCACGACCCAAACATCAAGGAACACGTGAACTCCCTGGGGGAAA 116134
Query 9981 ATCTAAAGACCCTACGGCTCCGCCTGCG 10008
| || |||||||| |||| | |||||
Sbjct 116135 AGCTGAAGACCCTCAGGCTGAGGCTGCG 116162
Score = 86.0 bits (94), Expect = 7e-12
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 10080 AGCTGCAGGAAAAAGGAATTTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTACA 10139
|||| || || | ||| | ||||||||||||||||| |||||||| || || |||||||
Sbjct 118321 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 118380
Query 10140 TAGAAGCATACATGACAATTAA 10161
||||| | ||||||||||| ||
Sbjct 118381 TAGAAACCTACATGACAATGAA 118402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552601344369440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |