Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03- 29] 16,711 sequences; 3,156,902,762 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq512 123 3e-23 >seq512 Length=1279947 Score = 123 bits (136), Expect = 3e-23 Identities = 116/148 (78%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 9861 AGGGCTACCTTGGATGCCAGGCCCTGTCAGAAATGATCCAATTCTACCTGGAGGAAGTCA 9920 |||| ||||| || ||||| ||| |||| || ||||||||||||||||||||||| || | Sbjct 116015 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAATTCTACCTGGAGGAGGTGA 116074 Query 9921 TGCCACAGGCTGAAAACCAGGACCCTGAAGCCAAAGACCATGTAAATTCTTTGGGTGAAA 9980 |||| |||||||| ||||| ||||| | ||| || || || || || |||| |||| Sbjct 116075 TGCCCCAGGCTGAGAACCACGACCCAAACATCAAGGAACACGTGAACTCCCTGGGGGAAA 116134 Query 9981 ATCTAAAGACCCTACGGCTCCGCCTGCG 10008 | || |||||||| |||| | ||||| Sbjct 116135 AGCTGAAGACCCTCAGGCTGAGGCTGCG 116162 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 10080 AGCTGCAGGAAAAAGGAATTTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTACA 10139 |||| || || | ||| | ||||||||||||||||| |||||||| || || ||||||| Sbjct 118321 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 118380 Query 10140 TAGAAGCATACATGACAATTAA 10161 ||||| | ||||||||||| || Sbjct 118381 TAGAAACCTACATGACAATGAA 118402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552601344369440