Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03- 29] 16,711 sequences; 3,156,902,762 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq975 87.8 2e-12 >seq975 Length=833997 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||||||||||||||| || ||| || || || ||||| || || | | Sbjct 558521 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCA 558580 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 |||| || | ||| || || ||||| || ||||| || || ||| | || | |||| Sbjct 558581 AAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC-CTGAATCTTGGCCTTTAC 558639 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | ||| | || || | || || ||||||| || | || || || || || ||||| Sbjct 558640 ATTTTCTATTGTATCCGACGGTTCAACCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTT 558699 Query 138600 TACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 558700 CACGAAAATCTGCAT 558714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496158736987920