Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq788 125 7e-24
seq541 123 2e-23
seq203 116 4e-21
seq322 100 3e-16
seq4063 91.5 1e-13
seq1526 86.0 6e-12
seq1 86.0 6e-12
seq1818 84.2 2e-11
seq975 84.2 2e-11
seq878 84.2 2e-11
seq457 84.2 2e-11
>seq788
Length=1000743
Score = 125 bits (138), Expect = 7e-24
Identities = 159/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || |||||||| ||||||||| | || |||||| |||
Sbjct 445223 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 445164
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362
|||| | | | | | |||| ||||||| ||||| ||||| || |||||| |||||
Sbjct 445163 GACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCAT-CCCGCCTGACCA 445105
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || ||| ||||||||||||||||| || | || || || ||||| ||
Sbjct 445104 GCAGCGTCTGGTTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATAA 445045
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| || || | || ||||| |||||||| ||
Sbjct 445044 TATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCG 445009
>seq541
Length=1170729
Score = 123 bits (136), Expect = 2e-23
Identities = 168/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || ||||| || || || || ||||| ||||||||| | || || ||| ||
Sbjct 610735 AAAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 610676
Query 38301 ACCGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| |||| | | | ||||| | || | || |||| || |||||||| || ||| | ||
Sbjct 610675 AGTGACACCATCGAAAACG-TGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGA 610617
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||| ||||||| | || ||||| |||||||| || | ||||| || || ||
Sbjct 610616 CCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTA 610557
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||||||| || || | || || || |||| || || |||| || |||
Sbjct 610556 CAACATCCAGAAAGAGTCAACTCTCCACCTGGTTCTCTGTCTGAGGGGTGGC 610505
>seq203
Length=1941613
Score = 116 bits (128), Expect = 4e-21
Identities = 155/212 (73%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || |||||||| | ||||||| |||| || ||| |||
Sbjct 1856181 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGAACATCACCCTCGAGGTTGAGCCCAGT 1856122
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362
|||| | | | | | |||| ||||||| ||||| |||| || |||||| |||||
Sbjct 1856121 GACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGACAT-CCCGCCTGACCA 1856063
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || |||| ||||||||||||||||| | | || ||||| ||||| ||
Sbjct 1856062 GCAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGCTGGCCGTACCCTGTCAGACTATAA 1856003
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGC 38454
||||| | || | || ||||| |||||||
Sbjct 1856002 TATCCAGA--GAGTCCACCCTGCACTTGGTGC 1855973
>seq322
Length=1513654
Score = 100 bits (110), Expect = 3e-16
Identities = 154/213 (72%), Gaps = 5/213 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || ||||| ||||| ||||||||| | || |||||| |||
Sbjct 277334 ATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACCCT-GAGGTCGAGCCCAGT 277392
Query 38304 GACAGCG-TGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361
|||| | || || | | |||| ||||||| ||| | ||||| || |||||| ||||
Sbjct 277393 GACACCACTGAGAATG-TCAAAGCCAAAATCCAAGACCAGGAGGGCAT-CCCGCCTGACC 277450
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||| | || | || |||||||||||||| || || | | || || ||||| |
Sbjct 277451 AGCAGTGTCTGACTTTTGCGGGCAAACAGCTAGAAGATGGCTGTACTCTGTCAGACTATA 277510
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGC 38454
| ||||| || || | || ||||| |||||||
Sbjct 277511 ATATCCAGAAAGAGTCCACCCTGCACTTGGTGC 277543
>seq4063
Length=161870
Score = 91.5 bits (100), Expect = 1e-13
Identities = 166/241 (69%), Gaps = 9/241 (4%)
Strand=Plus/Plus
Query 38239 AAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGG 38298
|||| ||||| || || || || || || ||| || ||||||||| || | | ||||
Sbjct 8177 AAAAGATGCAGATCTTTGTGAAGACCCTAGTGGGAAAGACCATCACCCTCAAGGCCGAGC 8236
Query 38299 CCACCGACAGCGTGCAAACGCTTAAAGAA-------AAAATCCTCGACAAAGAGGGAATT 38351
||| |||| | | ||| | ||| | ||||||| ||||| |||| ||
Sbjct 8237 CCAGTGACACCATTGAAAATGTCAAAAATCCAAGCCAAAATCCAAGACAAGGAGGACAT- 8295
Query 38352 CCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCT 38410
|| ||| ||||| |||| |||| || |||||||||||||||||| | | ||||| ||
Sbjct 8296 CCTGCCTGACCAGCAGCATCTCAGTTCTGCGGGCAAACAGCTGGACAATGGACGCACTCT 8355
Query 38411 CAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
| ||| |||| | || || || | || |||| |||||||| || || |||| ||
Sbjct 8356 CTCAGACCACAATGTACAGAAAGAGTCCACCGTGCACTTGGTGCTTCGCCTGCGAGGTGG 8415
Query 38471 C 38471
|
Sbjct 8416 C 8416
>seq1526
Length=597461
Score = 86.0 bits (94), Expect = 6e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||| || | || | || || ||||||||||| |||| ||||||||| ||||||
Sbjct 458236 CAGCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAGGACGGGCGCACCCTGTCAGACTAC 458295
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||| ||||| | || ||||| ||||| ||||| ||||| || ||
Sbjct 458296 AACATCCAGAAGGAGTCCACTCTGCACTTGGTCCTGCGCTTGAGGGGAGG 458345
>seq1
Length=12736304
Score = 86.0 bits (94), Expect = 6e-12
Identities = 136/194 (70%), Gaps = 1/194 (1%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || ||||| ||||| || ||||| || ||||||||| |||| || || ||
Sbjct 12236889 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 12236830
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| || | | ||| | || | || || | || || || |||||||| ||||
Sbjct 12236829 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCT-CCGAT 12236771
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||| | || || | || ||||| || ||||| || | ||||| | ||||||
Sbjct 12236770 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTAC 12236711
Query 38421 AACATCCAAAAGGA 38434
||||| ||||||||
Sbjct 12236710 AACATTCAAAAGGA 12236697
>seq1818
Length=636242
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || ||||| ||||| || ||||| || ||||||||| |||| || || ||
Sbjct 433230 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 433171
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| || | | ||| | || | || || | || || || |||||||| | ||
Sbjct 433170 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 433111
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||| | || || | || ||||| | ||||| || | ||||| | ||||||
Sbjct 433110 CAGCAGAGACTGATCTTTGCTGGCAAGTAACTGGAAGATGGACGCACTTTGTCTGACTAC 433051
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
||||| |||||||| | || || ||| | ||| ||
Sbjct 433050 AACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTG 433015
>seq975
Length=833997
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || ||||| ||||| || ||||| || ||||||||| |||| || || |
Sbjct 558717 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCG 558658
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| || | | ||| | || | || || | || || || |||||||| | ||
Sbjct 558657 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 558598
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||| | || || | || ||||| || ||||| || | ||||| | ||||||
Sbjct 558597 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTAC 558538
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
||||| |||||||| | || || ||| | ||| ||
Sbjct 558537 AACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTG 558502
>seq878
Length=898115
Score = 84.2 bits (92), Expect = 2e-11
Identities = 93/124 (75%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976
|||| || ||| ||| ||||| ||| || || | ||| ||||| ||||||||||| |
Sbjct 679154 CCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCT 679095
Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036
||||||| ||||| | || ||| || |||||||||| || || || || || ||||
Sbjct 679094 TGAGCCAGAATATTGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 679035
Query 133037 CCAC 133040
||||
Sbjct 679034 CCAC 679031
>seq457
Length=1382432
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
|||| | || | || || || || || | |||||| |||| |||| | || || ||| |
Sbjct 946084 AAAATTACAGACCTTTGTGAAGACCCTGAGGGGCAAGACCAGCACCCTGGAGGTTGAGCC 946143
Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
|| |||| | | || | |||| |||| || ||||||||||| || || | ||
Sbjct 946144 CAGTGACACCACCGAGACCATCAAAGCCAAAACCCAAGACAAAGAGGGCATCCCTCCTGA 946203
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| |||| || | | ||||||||||||||||| || | ||| | ||| ||| |
Sbjct 946204 CCAGCAGCATCTGACCTTTGCGGGCAAACAGCTGGAGGATGGCCGCGCTCTCTCAGACCA 946263
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|| | ||| || || | || ||||| ||||||| ||
Sbjct 946264 CAGTAGCCAGAAAGAGTCCACCCTGCACCTGGTGCTTCG 946302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500068320154240
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