Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq962 178 5e-39
seq975 125 3e-23
seq9145 123 1e-22
seq2520 123 1e-22
seq1818 120 1e-21
seq293 118 4e-21
seq1 109 2e-18
seq182 105 3e-17
seq1781 96.9 1e-14
seq371 93.3 2e-13
seq4269 89.7 2e-12
seq124 89.7 2e-12
seq1095 87.8 7e-12
seq168 87.8 7e-12
>seq962
Length=973860
Score = 178 bits (196), Expect = 5e-39
Identities = 351/517 (68%), Gaps = 7/517 (1%)
Strand=Plus/Plus
Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150
|||||||| | |||||| |||||| | |||||| | | || | ||||| | || |||
Sbjct 296389 AACACAGTCTTTGATGCCAAACGTCTGATTGGCAGGAAGTTTAATGATCCTGTAGTGCAA 296448
Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTA--TATTC 451208
||| | ||| | | ||| | | ||| | ||| || ||| |||||| | ||||
Sbjct 296449 TCAGATATGAAACTTTGGCCTTTTCAAGTAATCAATGAAGGAGGCAAGCCCAAGGTATTG 296508
Query 451209 AAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTC 451268
|| | || ||||| || | ||| |||| |||||| ||||| || |||||||| |
Sbjct 296509 GTGTCA--TACAAAGGGGAGAAAAAAGCTTTCTATCCTGAGGAAATCTCTTCTATGGTAC 296566
Query 451269 TTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAA 451328
| || || ||||| || || || || | | | || || ||||| |||| || |
Sbjct 296567 TGACGAAGATGAAGGAGACTGCTGAGGCTTTTTTGGGCCACCCCGTTACCAATGCTGTGA 296626
Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388
| ||||| || || |||||||||||| | ||||| || || || || |||||||| |
Sbjct 296627 TCACTGTACCAGCGTATTTCAATGATTCTCAACGCCAGGCCACCAAGGATGCAGGCGTGA 296686
Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448
|||| ||| | ||||| || ||||||| |||||||| ||||| ||||| | || ||||
Sbjct 296687 TTGCAGGTCTCAATGTGCTAAGAATTATCAATGAACCCACAGCTGCTGCCATTGCGTATG 296746
Query 451449 GACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508
| ||| ||| | || | ||| | || | || | |||||| | |||||||
Sbjct 296747 GCTTAGATAAAGC---AGGTCAGGGAGAGCGACATGTCTTGATCTTTGATCTAGGTGGAG 296803
Query 451509 GAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCA 451568
| || |||| || | || | || || ||||| | ||||| || ||||| ||
Sbjct 296804 GCACGTTTGATGTGTCCATCCTGACCATAGATGATGGAATTTTTGAGGTGAAGGCCACAG 296863
Query 451569 ATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
||| ||||| || || ||||| || || |||| ||
Sbjct 296864 CTGGGGATACCCACCTGGGAGGGGAGGACTTTGACAA 296900
>seq975
Length=833997
Score = 125 bits (138), Expect = 3e-23
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | |||||||| ||||| || || || || || || || || || |||||| | ||
Sbjct 558715 AATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCGTC 558656
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
|||| || ||| | | || || ||||| ||||||||||||||||||||||||||
Sbjct 558655 GGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCA 558596
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
|| | | || || | || || ||||| ||||||||| | |||||| | || || ||
Sbjct 558595 GCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAA 558536
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
||| | ||||| | || ||||| | || || |||||
Sbjct 558535 CATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 558497
>seq9145
Length=4041
Score = 123 bits (136), Expect = 1e-22
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| ||||| || || || || || || ||||| || |||||| | ||
Sbjct 497 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCA 438
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || ||| ||| || || ||||| |||||||||||||||||||||||||
Sbjct 437 GATACAATAGAAAATATAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGATCAG 378
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| | | || || | || || ||||| ||||||||| | |||||| | || || ||
Sbjct 377 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 318
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
||| | |||| | || ||||| | || || |||||
Sbjct 317 ATTCAAAAGGCGTCCACTCTTCATCTTGTGTTGAGACT 280
>seq2520
Length=369870
Score = 123 bits (136), Expect = 1e-22
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| ||||| || || || || || || ||||| || |||||| | ||
Sbjct 183991 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCA 184050
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || ||| ||| || || ||||| |||||||||||||||||||||||||
Sbjct 184051 GATACAATAGAAAATATAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGATCAG 184110
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| | | || || | || || ||||| ||||||||| | |||||| | || || ||
Sbjct 184111 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 184170
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
||| | |||| | || ||||| | || || |||||
Sbjct 184171 ATTCAAAAGGCGTCCACTCTTCATCTTGTGTTGAGACT 184208
>seq1818
Length=636242
Score = 120 bits (132), Expect = 1e-21
Identities = 158/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | |||||||| ||||| || || || || || || || || || |||||| | ||
Sbjct 433228 AATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCCTC 433169
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
|||| || ||| | | || || ||||| ||||||||||||||||||||||||||
Sbjct 433168 GGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCA 433109
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
|| | | || || | || || |||| ||||||||| | |||||| | || || ||
Sbjct 433108 GCAGAGACTGATCTTTGCTGGCAAGTAACTGGAAGATGGACGCACTTTGTCTGACTACAA 433049
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
||| | ||||| | || ||||| | || || |||||
Sbjct 433048 CATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 433010
>seq293
Length=1771812
Score = 118 bits (130), Expect = 4e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| ||||| || | || || || || ||||| || | |||| | ||
Sbjct 533874 ATGCAGATTTTCGTGAAAACTCTTATGGGGAAGACCATCACTCTCGAGGCTGAACCCTCG 533933
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || ||| | | || || ||||| ||||||||||||||||||||||||||
Sbjct 533934 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 533993
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| | || || || | || || ||||| ||||||||| | ||| || | || || ||
Sbjct 533994 CAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTCTGTCTGACTACAAC 534053
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
| | | ||||| | || ||||| | || ||||||||
Sbjct 534054 ACTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAGACT 534091
>seq1
Length=12736304
Score = 109 bits (120), Expect = 2e-18
Identities = 140/192 (73%), Gaps = 1/192 (1%)
Strand=Plus/Minus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | |||||||| ||||| || || || || || || || || || |||||| | ||
Sbjct 12236887 AATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCCTC 12236828
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
|||| || ||| | | || || ||||| |||||||||||||||||||| |||||
Sbjct 12236827 GGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCC-GATCA 12236769
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
|| | | || || | || || ||||| ||||||||| | |||||| | || || ||
Sbjct 12236768 GCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAA 12236709
Query 391229 TATTGATAAGGA 391240
||| | |||||
Sbjct 12236708 CATTCAAAAGGA 12236697
>seq182
Length=1985155
Score = 105 bits (116), Expect = 3e-17
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||| | ||||| || || || || || || | ||||| | |||| | ||
Sbjct 1379202 ATGCAGATTTTCCTGAAAACCCTTACGGGGAAGACCATCATCCTTGAGGCTGAACCCTCG 1379143
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
| || || ||| | | | || ||||| ||||||||||||||||||||||||||
Sbjct 1379142 GGTACAATAGAAAATGTACAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 1379083
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| | | || || | || || ||||| ||||||||| | |||||| | || || ||
Sbjct 1379082 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGCACTTTGTCTGACTACAAC 1379023
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
||| | ||||| | || ||||| | || || |||||
Sbjct 1379022 ATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 1378985
>seq1781
Length=688327
Score = 96.9 bits (106), Expect = 1e-14
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
||||| ||||||| ||||||| || || |||||||||||||| ||||| || |||||
Sbjct 253687 GTTACCCATGCAGTTGTTACTGTACCAGCCTATTTCAATGATGCCCAACGCCAGGCAACC 253746
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425
|||||||| ||| ||||||||| || ||||| | | || || ||||| ||
Sbjct 253747 AAAGATGCTGGAACTATTGCTGGATTGAATGTCATGAGGATCATCAATGAGCC 253799
>seq371
Length=1453275
Score = 93.3 bits (102), Expect = 2e-13
Identities = 152/218 (70%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| || ||||| || | || || || || ||||| || |||||||| ||
Sbjct 449570 ATGCAGATTTTTGTGAAAACCCTTATGGGGAAGACCATCACTCTCGAGGTTGAATCCTCA 449629
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
| || | ||| | | || || || || ||||||||||||||||||||||||||
Sbjct 449630 GGTACAGTAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 449689
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| | | || ||| | || || ||||| ||||| || ||||||| || || |
Sbjct 449690 CA--GACTGATATTCACTGGCAAGCAACTGGAAGACAGACAAACTTTGTGTGACTACAGC 449747
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
||| | ||||| | || ||||| | || || |||||
Sbjct 449748 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 449785
>seq4269
Length=157414
Score = 89.7 bits (98), Expect = 2e-12
Identities = 168/245 (69%), Gaps = 4/245 (2%)
Strand=Plus/Minus
Query 96049 TGCAATTTGTGGCACTAGGGGATCGTCAGGATTTGGGTCAGCCAATAAACTGCATAA--G 96106
|||||| | |||||||||||| || || || ||||| ||| || | || | || |
Sbjct 25143 TGCAATCTCTGGCACTAGGGGGTCATCTGGGTTTGGATCA--CATAGCAGTGAACAAACG 25086
Query 96107 GATAAAAGTACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAAA 96166
|||||||| |||||| ||| |||| || || ||| | | ||| |||||| | |
Sbjct 25085 GATAAAAGAACTTTAGAAATAGTTAAAGCAGGAGACCACTGTGATCTTAGAATATCGAGA 25026
Query 96167 CAAATTGCACCTGTAGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTTA 96226
||||| || || | |||||||||||||| |||| ||| ||||| || |||
Sbjct 25025 CAAATGCTGCCATTACTGTTAATATTTGGATGACAAATTCTTGTTGTAAATGCAACCTTA 24966
Query 96227 GGAGGCTTATATGGATAGTCTTCAGGAAAAGTAATTTCTAATTGGAATACTCCACCCTCA 96286
|| || || | || |||||| ||||||| |||| || |||||| || || | |
Sbjct 24965 GGTGGTTTGAAGGGGTAGTCTGTAGGAAAATGAATTGTCAAAAAGAATACACCGCCTTGA 24906
Query 96287 TAGGG 96291
|| ||
Sbjct 24905 TATGG 24901
>seq124
Length=2465673
Score = 89.7 bits (98), Expect = 2e-12
Identities = 90/117 (77%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| ||||| || || || || || || |||||||| |||||| | ||
Sbjct 2104773 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTTGAGGTTGAACCCTCA 2104714
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166
|||| || ||| | | || || ||||| ||||||||||||||||||||||||
Sbjct 2104713 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 2104657
>seq1095
Length=763602
Score = 87.8 bits (96), Expect = 7e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426
|| ||||| ||||| || || || |||| ||||||| ||||| | |||||||||||
Sbjct 577805 GCCACTAAGGATGCTGGCCAGATATCTGGACTAAATGTGCTTCGGGTAATTAATGAACCC 577864
Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA 451467
||||| |||||||| || ||||| |||| |||||| ||||
Sbjct 577865 ACAGCTGCTGCTCTGGCCTATGGTCTAGACAAATCAGAAGA 577905
>seq168
Length=2212426
Score = 87.8 bits (96), Expect = 7e-12
Identities = 153/217 (71%), Gaps = 7/217 (3%)
Strand=Plus/Minus
Query 96049 TGCAATTTGTGGCACTAGGGGATCGTCAGGATTTGGGTCAGCCAATAAACTGCATAA--G 96106
|||||| | |||||||||||| || || || ||||| ||| || | || | || |
Sbjct 1567087 TGCAATGTCTGGCACTAGGGGGTCATCTGGGTTTGGATCA--CATAGCAGTGAACAAATG 1567030
Query 96107 GATAAAAGTACTTTACTAAT-GTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAA 96165
|||||||| |||||| ||| |||||| || || ||| | | |||||||||| |
Sbjct 1567029 GATAAAAGAACTTTAGAAATAGTTTAA-GCAGGAGACCACTGTAATCTTAAAATATCAAG 1566971
Query 96166 ACAAATTGCACCTGTAGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTT 96225
|||||| || || | ||||||||||||||||||| ||||| ||| || ||
Sbjct 1566970 ACAAATGCTGCCATTACTGTTAATATTTGGATGATAAATTCTTGTTTT-AATGCAACCTT 1566912
Query 96226 AGGAGGCTTATATGGATAGTCTTCAGGAAAAGTAATT 96262
||| | || | || |||||| ||||||| ||||
Sbjct 1566911 AGGTAGTTTGAAAGGGTAGTCTGTAGGAAAATGAATT 1566875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975295379550788
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