Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq377 129 1e-24
seq293 127 5e-24
seq9145 123 6e-23
seq2520 123 6e-23
seq788 118 2e-21
seq304 109 1e-18
seq322 96.9 8e-15
seq203 93.3 9e-14
seq371 89.7 1e-12
seq591 87.8 4e-12
seq457 84.2 5e-11
>seq377
Length=1354867
Score = 129 bits (142), Expect = 1e-24
Identities = 157/213 (74%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| ||||| ||||| |||||||| || ||||||||||| | |||||| | ||||||||
Sbjct 824192 AACCAGGTGGAGAGTTGACTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCTTC 824251
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
| |||||| | || |||||||| | || ||||| || || ||||| ||||| | |||
Sbjct 824252 CATCTGCTTGCTGGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATATTG 824311
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGT 195107
|| || ||| || || ||||||||||| ||| ||||| || ||||| | ||
Sbjct 824312 GATATTCGCCTTCACATTTTCAATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGT 824368
Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| || || | || || ||||| | |||||
Sbjct 824369 CTTGCCGGTTAGGGTCTTCACGAAGATCTGCAT 824401
>seq293
Length=1771812
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
||||| || ||||| |||||||||||||| |||||| | ||||| || | ||||| |
Sbjct 534091 AGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTAGTCAGACAGAGTGCGT 534032
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| || ||||| || || ||||| | || || || || |||||||| |||||
Sbjct 534031 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCC 533972
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|| || ||||| || ||| || || || || || ||||| ||| | || || ||
Sbjct 533971 TTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTCGAGAGTG 533912
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || | | |||||| ||||| | |||||
Sbjct 533911 ATGGTCTTCCCCATAAGAGTTTTCACGAAAATCTGCAT 533874
>seq9145
Length=4041
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| ||||| |||||||||||| | |||||||| ||||| || | | ||| |
Sbjct 280 AGTCTCAACACAAGATGAAGAGTGGACGCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 339
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| || ||||| || || ||||| |||| || || || |||||||| |||||
Sbjct 340 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCC 399
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|| | ||||| || ||| | || || || || || || ||| || || || ||
Sbjct 400 TTATTCTGAATCTTGGCCTTTATATTTTCTATTGTATCTGAGGGTTCAACCTCGAGAGTG 459
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || || | ||||| ||||| | |||||
Sbjct 460 ATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 497
>seq2520
Length=369870
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| ||||| |||||||||||| | |||||||| ||||| || | | ||| |
Sbjct 184208 AGTCTCAACACAAGATGAAGAGTGGACGCCTTTTGAATGTTGTAGTCAGACAAAGTACGT 184149
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| || ||||| || || ||||| |||| || || || |||||||| |||||
Sbjct 184148 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCC 184089
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|| | ||||| || ||| | || || || || || || ||| || || || ||
Sbjct 184088 TTATTCTGAATCTTGGCCTTTATATTTTCTATTGTATCTGAGGGTTCAACCTCGAGAGTG 184029
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || || | ||||| ||||| | |||||
Sbjct 184028 ATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 183991
>seq788
Length=1000743
Score = 118 bits (130), Expect = 2e-21
Identities = 151/207 (73%), Gaps = 6/207 (3%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || ||||||||||| || ||||| || || | ||||| | |||||||| |||||
Sbjct 445020 GTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTCCAGCTG 445079
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| || || || | || || || ||||| || || ||||| || |||||||| |||||
Sbjct 445080 TTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTGGATTTT 445139
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCC 195113
||||| |||||||||||||| ||| || || |||||||| | ||||| ||
Sbjct 445140 GGCTTTGACATTCTCAATGGTGTC---ACTGGGCTCGACCTCAAGGGTGATGGTCTTGCC 445196
Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| || || || || | |||||
Sbjct 445197 CGTCAGGGTCTTCACAAAGATCTGCAT 445223
>seq304
Length=1579526
Score = 109 bits (120), Expect = 1e-18
Identities = 163/228 (71%), Gaps = 4/228 (2%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTA-ATCGGCAAGAGTTCT 194981
|||||||| ||||| |||||||||||||| |||||||| ||||| || | ||| ||| |
Sbjct 417591 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGATGGACAA-AGTACA 417649
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
||||| | || ||||| || || ||||| |||| || || || ||||||| ||||
Sbjct 417650 TTCATCTCCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCACGAGGAATTTCTTC 417709
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
|| || ||||| || ||| || || || | || |||| ||| || ||||| ||
Sbjct 417710 CTTATCCTGAATCTTGACCTTTACATTTTCTGTTGTAGCCGAGGGTTCAACCTCAAGAGT 417769
Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT--ATGGT 195147
| |||| || | ||||| ||||| | ||||||| |||||
Sbjct 417770 GATAGTCTACTTGGTAAGGGTTTTCACGAAAATCTGCATTTTGATGGT 417817
>seq322
Length=1513654
Score = 96.9 bits (106), Expect = 8e-15
Identities = 147/207 (71%), Gaps = 7/207 (3%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || ||||||||||| || ||||| || || | ||||| | |||||||| |||||
Sbjct 277536 GTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACAGCCATCTTCTAGCTG 277477
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| || || || | || | || ||||| || || ||||| || | |||||| |||||
Sbjct 277476 TTTGCCCGCAAAAGTCAGACACTGCTGGTCAGGCGGGATGCCCTCCTGGTCTTGGATTTT 277417
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCC 195113
||||| |||||| ||||||| ||| || || || ||||| | ||||| ||
Sbjct 277416 GGCTTTGACATTCTCAGTGGTGTC---ACTGGGCTCGACCTC-AGGGTGATGGTCTTGCC 277361
Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | || || || || | |||||
Sbjct 277360 TGTGAGGGTCTTCACAAAGATCTGCAT 277334
>seq203
Length=1941613
Score = 93.3 bits (102), Expect = 9e-14
Identities = 146/207 (71%), Gaps = 8/207 (4%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || ||||||||| | | ||||| || || | || || | ||| |||| |||||
Sbjct 1855980 GTGCAGGGTGGACTCTCT--GGATATTATAGTCTGACAGGGTACGGCCAGCTTCCAGCTG 1856037
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| || || || || || || || ||||| || || ||| | || |||||||| |||||
Sbjct 1856038 TTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGTCCTCCTTGTCTTGGATTTT 1856097
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCC 195113
||||| |||||||||||||| ||| || || || ||||| | |||| ||
Sbjct 1856098 GGCTTTGACATTCTCAATGGTGTC---ACTGGGCTCAACCTCGAGGGTGATGTTCTTGCC 1856154
Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| || || ||||| | |||||
Sbjct 1856155 CGTCAGGGTCTTCACGAAGATCTGCAT 1856181
>seq371
Length=1453275
Score = 89.7 bits (98), Expect = 1e-12
Identities = 151/218 (69%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| ||||| |||||||||||||| |||||||| |||| || | ||||
Sbjct 449785 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACACAAAGTTTGT 449726
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
| ||||| || ||||| || | ||| || |||| || || || |||||||| |||||
Sbjct 449725 CTGTCTTCCAGTTGCTTGCCAGTGAATATCAGTC--TGCTGATCAGGAGGAATTCCTTCC 449668
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|| || || || || ||| || || || | || | || ||| || || || ||
Sbjct 449667 TTATCCTGGATCTTGGCCTTTACATTTTCTACTGTACCTGAGGATTCAACCTCGAGAGTG 449608
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || | | ||||| || || | |||||
Sbjct 449607 ATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 449570
>seq591
Length=1213786
Score = 87.8 bits (96), Expect = 4e-12
Identities = 143/205 (70%), Gaps = 6/205 (3%)
Strand=Plus/Minus
Query 194941 AGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTA 195000
|| || ||| |||| | || ||||| || | |||| | |||||||| ||||||||
Sbjct 33695 AGGGTTGACACTTTCCGGATGTTGTAGTCAGAAAGAATGTGGCCATCTTCCAGCTGCTTG 33636
Query 195001 CCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGC 195060
||||| ||||| || | || ||| | | || ||||||||||| || || | || |
Sbjct 33635 CCTGCAAAGATGAGCCTCTGCTGGCCACGGGGGATGCCTTCTTTATCCTGGGTCTTGGCC 33576
Query 195061 TTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
|| || |||| ||||| || ||| |||||| || ||||| | ||||| | |||
Sbjct 33575 TTCACATTCTTCATGGTATC---ACTGGGTTCCACCTCCAGGGTGATGGTCTTACAGGTC 33519
Query 195118 AAAGTTTTTACGAACACTTGCATTT 195142
| || || | ||| || |||||||
Sbjct 33518 AGGGTCTTCATGAAGACCTGCATTT 33494
>seq457
Length=1382432
Score = 84.2 bits (92), Expect = 5e-11
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || ||||||||||| || || ||| || | |||| | ||||| ||
Sbjct 946296 ACCAGGTGCAGGGTGGACTCTTTCTGGCTACTGTGGTCTGAGAGAGCGCGGCCATCCTCC 946237
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||| || || || ||| | || | || ||||| ||||| ||||| |||||||||||
Sbjct 946236 AGCTGTTTGCCCGCAAAGGTCAGATGCTGCTGGTCAGGAGGGATGCCCTCTTTGTCTTGG 946177
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080
|||| |||| | |||| |||||||
Sbjct 946176 GTTTTGGCTTTGATGGTCTCGGTGGTGTC 946148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109244049241337
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