Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03- 29] 16,711 sequences; 3,156,902,762 total letters Query= NC_016448.1 Length=196691 Score E Sequences producing significant alignments: (Bits) Value seq1651 125 9e-24 >seq1651 Length=578125 Score = 125 bits (138), Expect = 9e-24 Identities = 177/248 (71%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 2207 ACTGAAGAACATTCAGGTGAGCAATCACAGTCAACTGTCTCAGAATCGGATCTGCGAGAT 2266 ||||| |||| | || | |||||||| |||||| ||| | ||| ||| ||||| Sbjct 456748 ACTGAGGAACTTACAAATTGCCAATCACACGTGGCTGTCTGAGATTGGGACCTGTGAGAT 456689 Query 2267 CCATCTGACCTGTTCTGTCGAGGATCCCAATGACAACATCTCCTTCAAATGGGAGGCCTT 2326 ||| |||||||| ||||| ||| || | ||||||| | ||| | | ||| ||| | Sbjct 456688 CCACCTGACCTGCTCTGTAGAGAATTCAAATGACACCTTCT---TAAGGTGGCAGGTTGT 456632 Query 2327 GGGCAAGACGCTTCTACGCGAGCCCAACCTCACGACCTCCTGGGACCCCAGGAACAGCAG 2386 || || ||| | || || | |||||||| | ||||||||||||||||| ||| Sbjct 456631 AGGAAACACGTCTATAAATGAAGCAAACCTCACTATTTCCTGGGACCCCAGGAATTCCAG 456572 Query 2387 TGAGCAGAACTACACGTGCATCGCCGAAAACGCTGTGAGCAATCTCTCTTTCACGGTCTC 2446 ||| ||||| | ||| ||||| || || || |||| |||||| | || ||| | ||||| Sbjct 456571 TGAACAGAAGTTCACCTGCATAGCTGAGAATACTGTCAGCAATATATCCTTCTCTGTCTC 456512 Query 2447 GGCCCAGA 2454 |||||| Sbjct 456511 CACCCAGA 456504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629151750605560