Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_016448.1
Length=196691
Score E
Sequences producing significant alignments: (Bits) Value
seq1651 125 9e-24
>seq1651
Length=578125
Score = 125 bits (138), Expect = 9e-24
Identities = 177/248 (71%), Gaps = 3/248 (1%)
Strand=Plus/Minus
Query 2207 ACTGAAGAACATTCAGGTGAGCAATCACAGTCAACTGTCTCAGAATCGGATCTGCGAGAT 2266
||||| |||| | || | |||||||| |||||| ||| | ||| ||| |||||
Sbjct 456748 ACTGAGGAACTTACAAATTGCCAATCACACGTGGCTGTCTGAGATTGGGACCTGTGAGAT 456689
Query 2267 CCATCTGACCTGTTCTGTCGAGGATCCCAATGACAACATCTCCTTCAAATGGGAGGCCTT 2326
||| |||||||| ||||| ||| || | ||||||| | ||| | | ||| ||| |
Sbjct 456688 CCACCTGACCTGCTCTGTAGAGAATTCAAATGACACCTTCT---TAAGGTGGCAGGTTGT 456632
Query 2327 GGGCAAGACGCTTCTACGCGAGCCCAACCTCACGACCTCCTGGGACCCCAGGAACAGCAG 2386
|| || ||| | || || | |||||||| | ||||||||||||||||| |||
Sbjct 456631 AGGAAACACGTCTATAAATGAAGCAAACCTCACTATTTCCTGGGACCCCAGGAATTCCAG 456572
Query 2387 TGAGCAGAACTACACGTGCATCGCCGAAAACGCTGTGAGCAATCTCTCTTTCACGGTCTC 2446
||| ||||| | ||| ||||| || || || |||| |||||| | || ||| | |||||
Sbjct 456571 TGAACAGAAGTTCACCTGCATAGCTGAGAATACTGTCAGCAATATATCCTTCTCTGTCTC 456512
Query 2447 GGCCCAGA 2454
||||||
Sbjct 456511 CACCCAGA 456504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629151750605560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |