Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq1818 116 3e-21
seq975 116 3e-21
seq293 109 5e-19
seq1 109 5e-19
seq9145 107 2e-18
seq2520 107 2e-18
seq788 107 2e-18
seq371 104 2e-17
seq182 100 3e-16
seq377 98.7 9e-16
seq203 95.1 1e-14
seq1526 93.3 4e-14
seq541 89.7 5e-13
seq322 84.2 2e-11
>seq1818
Length=636242
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | ||||| || || || || || || || ||||| || ||| || |
Sbjct 433227 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCCTCG 433168
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| ||| |||||| ||||| ||||| || || || |||||||| ||||| |||||
Sbjct 433167 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 433108
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||| || || | ||||| ||| | | |||| || || |||
Sbjct 433107 CAGAGACTGATCTTTGCTGGCAAGTAACTGGAAGATGGACGCACTTTGTCTGACTACAAC 433048
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||| || || || || | |||||| || | || || ||
Sbjct 433047 ATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 433001
>seq975
Length=833997
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | ||||| || || || || || || || ||||| || ||| | |
Sbjct 558714 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCGTCG 558655
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| ||| |||||| ||||| ||||| || || || |||||||| ||||| |||||
Sbjct 558654 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 558595
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||| || || || ||||| ||| | | |||| || || |||
Sbjct 558594 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAAC 558535
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||||||||| || || || || | |||||| || | || || ||
Sbjct 558534 ATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 558488
>seq293
Length=1771812
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | ||||| || | || || || || || ||||| | ||| || |
Sbjct 533873 GATGCAGATTTTCGTGAAAACTCTTATGGGGAAGACCATCACTCTCGAGGCTGAACCCTC 533932
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| |||||| ||||| ||||| || || || |||||||| ||||| |||||
Sbjct 533933 GGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCA 533992
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | ||||||||||| || || || ||||| ||| | | |||| || || ||
Sbjct 533993 GCAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTCTGTCTGACTACAA 534052
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTT 24915
|| ||||||||| || || || || | |||||
Sbjct 534053 CACTCAAAAGGAGTCCACTCTTCATCTTGTGTT 534085
>seq1
Length=12736304
Score = 109 bits (120), Expect = 5e-19
Identities = 143/197 (73%), Gaps = 1/197 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | ||||| || || || || || || || ||||| || ||| || |
Sbjct 12236886 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCCTCG 12236827
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| ||| |||||| ||||| ||||| || || || |||||||| ||||| |||||
Sbjct 12236826 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCC-GATCAG 12236768
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||| || || || ||||| ||| | | |||| || || |||
Sbjct 12236767 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAAC 12236708
Query 24884 ATTCAAAAGGAATCGAC 24900
||||||||||| || ||
Sbjct 12236707 ATTCAAAAGGAGTCTAC 12236691
>seq9145
Length=4041
Score = 107 bits (118), Expect = 2e-18
Identities = 154/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | ||||| || || || || || || || ||||| || ||| || |
Sbjct 498 GATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTC 439
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| |||||| |||| ||||| || | || |||||||| ||||| |||||
Sbjct 438 AGATACAATAGAAAATATAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGATCA 379
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | |||||||||| || || || ||||| ||| | | |||| || || ||
Sbjct 378 GCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 319
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919
||||||||||| || || || || | |||||| ||
Sbjct 318 CATTCAAAAGGCGTCCACTCTTCATCTTGTGTTGAGA 282
>seq2520
Length=369870
Score = 107 bits (118), Expect = 2e-18
Identities = 154/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | ||||| || || || || || || || ||||| || ||| || |
Sbjct 183990 GATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTC 184049
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| |||||| |||| ||||| || | || |||||||| ||||| |||||
Sbjct 184050 AGATACAATAGAAAATATAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGATCA 184109
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | |||||||||| || || || ||||| ||| | | |||| || || ||
Sbjct 184110 GCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 184169
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919
||||||||||| || || || || | |||||| ||
Sbjct 184170 CATTCAAAAGGCGTCCACTCTTCATCTTGTGTTGAGA 184206
>seq788
Length=1000743
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || || || || || || || || || || || |||
Sbjct 445224 GATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAG 445165
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || ||| || ||||||||||| || || || || || || ||
Sbjct 445164 TGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCA 445105
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| || | ||||| || ||||||||||| ||| | | ||||||| |||||
Sbjct 445104 GCAGCGTCTGGTTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATAA 445045
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || || || || || || ||||||||| | || | || || |||
Sbjct 445044 TATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCGCCTACGGGGTGGC 444996
>seq371
Length=1453275
Score = 104 bits (114), Expect = 2e-17
Identities = 156/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| ||| | ||||| || | || || || || || ||||| || ||| || |
Sbjct 449569 GATGCAGATTTTTGTGAAAACCCTTATGGGGAAGACCATCACTCTCGAGGTTGAATCCTC 449628
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
| |||||||||| ||||| |||||||| || || |||||||| ||||| |||||
Sbjct 449629 AGGTACAGTAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 449688
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTATA 24881
|| | |||| || | || || || ||||| || || |||| | || || || |
Sbjct 449689 GCA--GACTGATATTCACTGGCAAGCAACTGGAAGACA-GACAAACTTTGTGTGACTACA 449745
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919
|||||||||||| || || || || | |||||| ||
Sbjct 449746 GCATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGA 449783
>seq182
Length=1985155
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | ||||| || || || || || || | || || | ||| || |
Sbjct 1379203 GATGCAGATTTTCCTGAAAACCCTTACGGGGAAGACCATCATCCTTGAGGCTGAACCCTC 1379144
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
| ||| |||||| ||| | ||||| || || || |||||||| ||||| |||||
Sbjct 1379143 GGGTACAATAGAAAATGTACAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCA 1379084
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | |||||||||| || || || ||||| ||| | | |||| || || ||
Sbjct 1379083 GCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGCACTTTGTCTGACTACAA 1379024
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||||||||| || || || || | |||||| || | || || ||
Sbjct 1379023 CATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 1378976
>seq377
Length=1354867
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || |||||||| || || || | || || || || |||
Sbjct 824629 ATGCAGATCTTCGTGAAGACCCTAACCGGCAAGACCATCCCCCTGGAGGTGGAGCCCAGT 824570
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| || || ||||||||||| ||||| || || || || || ||
Sbjct 824569 GACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAG 824510
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | |||||||| || || |||||||| ||| | | | || |||||||||
Sbjct 824509 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTATAAC 824450
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || || || ||||| || ||| ||||
Sbjct 824449 ATCCAGAAAGAGTCGACCCTGCACCTGGT 824421
>seq203
Length=1941613
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || || || || | || || ||||| || || |||
Sbjct 1856182 GATGCAGATCTTCGTGAAGACCCTGACGGGCAAGAACATCACCCTCGAGGTTGAGCCCAG 1856123
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || ||| || ||||||||||| || | || || || || ||
Sbjct 1856122 TGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGACATCCCGCCTGACCA 1856063
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| |||| ||||| || ||||||||||| | | | | | ||||||| |||||
Sbjct 1856062 GCAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGCTGGCCGTACCCTGTCAGACTATAA 1856003
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || | || || || || |||||||||
Sbjct 1856002 TATCCAGA--GAGTCCACCCTGCACTTGGTG 1855974
>seq1526
Length=597461
Score = 93.3 bits (102), Expect = 4e-14
Identities = 81/101 (80%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 24830 TTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAA 24889
||||||||||||||||||||||||||||| | | | | ||||||| || ||||| ||
Sbjct 458245 TTGATCTTTGCCGGGAAACAGCTGGAGGACGGGCGCACCCTGTCAGACTACAACATCCAG 458304
Query 24890 AAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| || || || |||||||| |||| ||| | |||||
Sbjct 458305 AAGGAGTCCACTCTGCACTTGGTCCTGCGCTTGAGGGGAGG 458345
>seq541
Length=1170729
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || || || || || || || |||
Sbjct 610732 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 610673
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| || || ||||||||||| ||||| || || || || || ||
Sbjct 610672 GACACCATCGAAAACGTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAG 610613
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | |||||||| || || |||||||| ||| | | | || ||||| |||
Sbjct 610612 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 610553
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || || || || || || ||| ||||
Sbjct 610552 ATCCAGAAAGAGTCAACTCTCCACCTGGT 610524
>seq322
Length=1513654
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/211 (69%), Gaps = 1/211 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||||||| | || || || || || || || || || || || || || |||
Sbjct 277333 GATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACCCT-GAGGTCGAGCCCAG 277391
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| || | || ||| || ||||||||| | || || || || || || ||
Sbjct 277392 TGACACCACTGAGAATGTCAAAGCCAAAATCCAAGACCAGGAGGGCATCCCGCCTGACCA 277451
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || ||| ||||| || |||||||| || ||| | | ||||||| |||||
Sbjct 277452 GCAGTGTCTGACTTTTGCGGGCAAACAGCTAGAAGATGGCTGTACTCTGTCAGACTATAA 277511
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || || || || || || |||||||||
Sbjct 277512 TATCCAGAAAGAGTCCACCCTGCACTTGGTG 277542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449803622015080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |