Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq788 141 6e-29
seq203 116 2e-21
seq322 111 1e-19
seq541 107 1e-18
seq377 107 1e-18
seq1526 91.5 1e-13
seq975 91.5 1e-13
seq1 91.5 1e-13
seq4063 86.0 4e-12
seq1309 86.0 4e-12
seq176 84.2 1e-11
seq2535 82.4 5e-11
seq496 82.4 5e-11
>seq788
Length=1000743
Score = 141 bits (156), Expect = 6e-29
Identities = 161/214 (75%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | |||| ||| ||||| || |||||||| || || | || ||||
Sbjct 445012 AGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCT 445071
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || || || || || | ||| || |||||||| |||| | |||||||||||
Sbjct 445072 TCCAGCTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCT 445131
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| ||||| |||||| || || || | ||| ||| |||||| |||| ||| ||||
Sbjct 445132 TGGATTTTGGCTTTGAC--ATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGG 445189
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| ||||| |||||||| ||||||||||||||
Sbjct 445190 TCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 445223
>seq203
Length=1941613
Score = 116 bits (128), Expect = 2e-21
Identities = 154/211 (73%), Gaps = 6/211 (3%)
Strand=Plus/Plus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|||| ||| | |||| ||| |||| || |||||||| || ||| | || || | |||
Sbjct 1855975 ACCAAGTGCAGGGTGGACTC--TCTGGATATTATAGTCTGACAGGGTACGGCCAGCTTCC 1856032
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
|| || || || || || ||||| || |||||||| |||| | |||||||||| |
Sbjct 1856033 AGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGTCCTCCTTGTCTTGG 1856092
Query 34889 ATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946
||||| |||||| || || || | ||| ||| ||| || || | ||| ||| |||
Sbjct 1856093 ATTTTGGCTTTGAC--ATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGTTCT 1856150
Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| ||||| |||||||| || |||||||||||
Sbjct 1856151 TGCCCGTCAGGGTCTTCACGAAGATCTGCAT 1856181
>seq322
Length=1513654
Score = 111 bits (122), Expect = 1e-19
Identities = 153/211 (73%), Gaps = 5/211 (2%)
Strand=Plus/Minus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|||| ||| | |||| ||| ||||| || |||||||| || || | | |||| ||
Sbjct 277541 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACAGCCATCTTCT 277482
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
|| || || || || || |||| | |||||||| |||| | ||||||| ||| |
Sbjct 277481 AGCTGTTTGCCCGCAAAAGTCAGACACTGCTGGTCAGGCGGGATGCCCTCCTGGTCTTGG 277422
Query 34889 ATTTTTTGTTTGACGGATGCTA--TCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946
||||| |||||| || || | | ||| ||| |||||| ||| ||| |||||||
Sbjct 277421 ATTTTGGCTTTGAC--ATTCTCAGTGGTGTCACTGGGCTCGACCTCAG-GGTGATGGTCT 277365
Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || ||||||||||| ||||||||||||||
Sbjct 277364 TGCCTGTGAGGGTCTTCACAAAGATCTGCAT 277334
>seq541
Length=1170729
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | || |||||||| | || ||| ||||| ||||| || || ||
Sbjct 610506 CCACCCCTCAGACAGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 610565
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| ||||| ||||| || || ||||| || | |||||||| | ||
Sbjct 610566 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 610625
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| ||||| || || | || || || ||| | | || | ||| ||| ||| ||
Sbjct 610626 ATGCCCTCTTTATCTTGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACC 610685
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | ||| |||||||| || || |||||||| || |||||||||||
Sbjct 610686 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 610732
>seq377
Length=1354867
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| ||| |||||||| | ||| ||| ||||| |||||||| || ||
Sbjct 824403 CCACCCCTCAGGTGCAGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATCAGAA 824462
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| ||||| ||||| || || ||||| || | |||||||| | ||
Sbjct 824463 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 824522
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| ||||| || || | || || || || | | || | ||| ||| ||| ||
Sbjct 824523 ATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 824582
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | || |||||||| || || |||||||| || |||||||||||
Sbjct 824583 TCCAGGGGGATGGTCTTGCCGGTTAGGGTCTTCACGAAGATCTGCAT 824629
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | || ||| ||||| || || || || || || |||| ||||
Sbjct 824190 AGAACCAGGTGGAGAGTTGACTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCT 824249
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| ||||| | ||| ||||| || | |||||||| | || | ||||| || |
Sbjct 824250 TCCATCTGCTTGCTGGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATAT 824309
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || || | | || | ||| ||| ||| || || | ||| ||||||
Sbjct 824310 TGGATATTCGCCTTCACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 824369
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || || |||||||| || ||||||||||||
Sbjct 824370 TTGCCGGTTAGGGTCTTCACGAAGATCTGCATG 824402
>seq1526
Length=597461
Score = 91.5 bits (100), Expect = 1e-13
Identities = 80/100 (80%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
||||||||||| | |||||||| ||| | ||| ||||||||| ||||| ||||| ||
Sbjct 458345 CCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCTGAC 458286
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCA 34850
||| ||||| | || ||||| || || ||||| |||||||
Sbjct 458285 AGGGTGCGCCCGTCCTCCAGCTGTTTCCCGGCAAAGATCA 458246
>seq975
Length=833997
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|||| || || |||| || |||||| |||||||| ||||| || | |||| ||
Sbjct 558500 CTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCA 558559
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| ||||||||||| || || |||||||||| ||||| || | || | || |||||
Sbjct 558560 TCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTA 558619
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || || || | |||| | || | || || || | ||| |||
Sbjct 558620 TCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGACGGTTCAACCTCGAGGGTGATG 558679
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| ||||| ||||| || || || ||||||||
Sbjct 558680 GTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 558714
>seq1
Length=12736304
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/192 (71%), Gaps = 1/192 (1%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
|||||| |||||||| ||||| || | |||| |||| ||||||||||| || || ||
Sbjct 12236696 CTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAA 12236755
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|||||||| ||||| || | || | || ||||| || | || || || ||
Sbjct 12236756 GATCAGTCTCTGCTGATC-GGAGGAATTCCTTCCTTATCCTGAATCTTGGCCTTTACATT 12236814
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| |||| | || || || || || | ||| |||||||| ||||| ||||| || ||
Sbjct 12236815 TTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCAC 12236874
Query 34966 AAAGATCTGCAT 34977
|| ||||||||
Sbjct 12236875 GAAAATCTGCAT 12236886
>seq4063
Length=161870
Score = 86.0 bits (94), Expect = 4e-12
Identities = 151/219 (69%), Gaps = 7/219 (3%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | |||| ||| ||||| | || | ||| || || |||| ||| |
Sbjct 8400 AGCACCAAGTGCACGGTGGACTCTTTCTGTACATTGTGGTCTGAGAGAGTGCGTCCATTG 8341
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || || || || | | || | |||||||| || | | ||||||||||
Sbjct 8340 TCCAGCTGTTTGCCCGCAGAACTGAGATGCTGCTGGTCAGGCAGGATGTCCTCCTTGTCT 8281
Query 34886 TTTATTTT---TTG----TTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGT 34938
| ||||| ||| |||||| | | || | ||| ||| |||| | | | |||
Sbjct 8280 TGGATTTTGGCTTGGATTTTTGACATTTTCAATGGTGTCACTGGGCTCGGCCTTGAGGGT 8221
Query 34939 TATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||||||||| |||||||| ||||||||||||||
Sbjct 8220 GATGGTCTTTCCCACTAGGGTCTTCACAAAGATCTGCAT 8182
>seq1309
Length=750738
Score = 86.0 bits (94), Expect = 4e-12
Identities = 149/213 (70%), Gaps = 3/213 (1%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | |||| ||| ||||| || |||||| | || | | | ||||
Sbjct 105684 AGTACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGCCTGAGGGAGCGTGGCCATCC 105743
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || || | || || | ||||| | |||||||| |||| | |||||||||||
Sbjct 105744 TC-AGCTGTTGGCCTGCAGAAATCAGACACTGCTGGTCAGGCGGGATGCCCTCCTTGTCT 105802
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT-TCATTGGCCTCGACATCAACGGTTATGGT 34944
| ||||| |||||| | || | || ||| || |||||| || | ||| || ||
Sbjct 105803 TGGATTTTGGCTTTGACATTTT-TAACAATGTCACGGGGCTCGACCTCGAGGGTGATCGT 105861
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| ||| | || ||||| ||||||||||||||
Sbjct 105862 CTTGCCCATCAGAGTCTTCACAAAGATCTGCAT 105894
>seq176
Length=2148545
Score = 84.2 bits (92), Expect = 1e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| ||||||||| | | ||| ||||| ||||| || || || || |||| ||||
Sbjct 212432 AGAACCAGGTGAGAG-TCAACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 212374
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG-TC 34884
||||| ||||| | ||| ||||| || | | |||||| || || | |||||||| ||
Sbjct 212373 TCCAGCTGCTTGCTGGCAAAGATGAGCCTCTCCTGGTCATGGGGGATGCCCTCCTTTATC 212314
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || || || | | || | ||| ||| ||| || || | ||| |||||
Sbjct 212313 CTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 212254
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| | || |||||||| | |||||||||||
Sbjct 212253 CTTGCTGGTCAGGGTCTTCATGAAGATCTGCAT 212221
>seq2535
Length=378583
Score = 82.4 bits (90), Expect = 5e-11
Identities = 83/106 (78%), Gaps = 4/106 (4%)
Strand=Plus/Minus
Query 34874 CCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACAT 34931
||||||||||| | ||||| |||||| || || || | ||| ||| |||||| |
Sbjct 80266 CCCTCCTTGTCTTGGATTTTGGCTTTGAC--ATTCTCAATGGTGTCACTGGGCTCGACCT 80209
Query 34932 CAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| | ||| |||||||| ||||| |||||||| ||||||||||||||
Sbjct 80208 CGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 80163
>seq496
Length=1197557
Score = 82.4 bits (90), Expect = 5e-11
Identities = 149/215 (69%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | |||| ||| |||| || || ||||| || || ||| ||||
Sbjct 1032609 AGCACCAAGTGCAGGGTGGACTCTCTCTGGATATTGTAGTCGGACAG--TGCCGCCATCT 1032666
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || | || | | ||||| | || |||| || | | |||||||||||
Sbjct 1032667 TCCAGCTGTTCACCCACAGAAATCAGATGCAGCAGGTCAGGCAGGATGCCCTCCTTGTCC 1032726
Query 34886 TTTATTTTTTGTTTGACGGATGCTA--TCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || |||||| || || | | ||| ||| ||| || || | ||| ||||
Sbjct 1032727 TGGATGTTGGCTTTGAC--ATTCTCAGTGGTGTCAGTGGGCTCCACCTCGAGGGTGATGG 1032784
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||| ||||| |||||||| ||||||||||||||
Sbjct 1032785 TCTTGCCCGTCAGGGTCTTCTCAAAGATCTGCATG 1032819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325626467674109
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