Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03- 29] 16,711 sequences; 3,156,902,762 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq512 86.0 6e-12 >seq512 Length=1279947 Score = 86.0 bits (94), Expect = 6e-12 Identities = 72/87 (83%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 133311 AGCTCCAGGAACGCGGTGTGTACAAGGCCATGAGCGAGTTCGACATCTTCATCAACTACA 133370 ||||||| || | ||||| ||||| |||||||| ||||| ||||||||||||||||||| Sbjct 118321 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 118380 Query 133371 TAGAGACATATACCACCATGAA-ATGA 133396 |||| || || | || ||||| |||| Sbjct 118381 TAGAAACCTACATGACAATGAAGATGA 118407 Score = 82.4 bits (90), Expect = 7e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 133104 TGGGGTGCCAAGCACTCTCGGAGATGATCCAGTTCTACCTGGAAGAAGTCATGCCGCAGG 133163 |||| |||||||| | |||||||||||||| ||||||||||| || || ||||| |||| Sbjct 116024 TGGGTTGCCAAGCCTTGTCGGAGATGATCCAATTCTACCTGGAGGAGGTGATGCCCCAGG 116083 Query 133164 CAGAGAATCACGGACCAA 133181 | ||||| |||| |||| Sbjct 116084 CTGAGAACCACGACCCAA 116101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447717657837960