Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq1165 113 1e-21
seq823 100 9e-18
seq4756 98.7 3e-17
seq4402 98.7 3e-17
seq3991 98.7 3e-17
seq2970 98.7 3e-17
seq2679 98.7 3e-17
seq2141 98.7 3e-17
seq795 87.8 6e-14
>seq1165
Length=738443
Score = 113 bits (124), Expect = 1e-21
Identities = 68/72 (94%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 190243 GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 190184
Query 2829 CCGGGCTTCAGC 2840
||||| ||||||
Sbjct 190183 CCGGGTTTCAGC 190172
>seq823
Length=893735
Score = 100 bits (110), Expect = 9e-18
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||| ||||||||| ||||| |||||||||||||||||||||||| ||
Sbjct 697369 GGCCGAAATAGCTCAGCTGGGAGAGCGTTAGAGTGAAGATCTAAAGGTCCCTGGTTCGAC 697428
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||||||
Sbjct 697429 CCCGGGTTTCAGC 697441
Score = 96.9 bits (106), Expect = 1e-16
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||| ||||||||| || ||||||||||||||||||||||||||| ||
Sbjct 697924 GGCCGAAATAGCTCAGCTGGGAGAGCGTTCGACTGAAGATCTAAAGGTCCCTGGTTCGAC 697865
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 697864 CCCGGGTTTCGGC 697852
>seq4756
Length=97781
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 87373 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 87432
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 87433 CCGGGTTTCGGC 87444
>seq4402
Length=159629
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 59516 GCCGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGACC 59457
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 59456 CCGGGTTTCGGC 59445
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 97082 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 97023
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 97022 CCGGGTTTCGGC 97011
>seq3991
Length=164454
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 160893 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 160834
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 160833 CCGGGTTTCGGC 160822
>seq2970
Length=281960
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 53660 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 53601
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 53600 CCGGGTTTCGGC 53589
>seq2679
Length=364677
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 316960 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 316901
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 316900 CCGGGTTTCGGC 316889
>seq2141
Length=463334
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 94674 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 94615
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 94614 CCGGGTTTCGGC 94603
>seq795
Length=1132128
Score = 87.8 bits (96), Expect = 6e-14
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
|||||| ||||||||| |||||||| |||||||||||||||||||||||||||||| |
Sbjct 842311 GGCTGAGATAGCTCAGTAGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 842252
Query 2828 CCCGGG 2833
|| |||
Sbjct 842251 CCTGGG 842246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15846703064595
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |