Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq975 129 6e-25
seq1818 120 3e-22
seq9145 111 2e-19
seq2520 111 2e-19
seq1 105 7e-18
seq371 100 3e-16
seq182 89.7 5e-13
seq541 87.8 2e-12
seq203 86.0 6e-12
seq377 84.2 2e-11
seq788 82.4 8e-11
seq304 82.4 8e-11
>seq975
Length=833997
Score = 129 bits (142), Expect = 6e-25
Identities = 164/223 (74%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| |||||| || || || || || |||||||||||||||||||| | ||| ||| |
Sbjct 558497 AGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAA-AGTGCG 558555
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
|| || || || ||||| ||||| |||| | ||||||||| || || || |||||
Sbjct 558556 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTC 558615
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| || ||||| || || || || | ||| || |||| ||| || ||||| ||
Sbjct 558616 CTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGACGGTTCAACCTCGAGGGT 558675
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| || || || | ||||| |||||||| |||||||||
Sbjct 558676 GATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 558718
>seq1818
Length=636242
Score = 120 bits (132), Expect = 3e-22
Identities = 162/223 (73%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| |||||| || || || || || |||||||||||||||||||| | ||| ||| |
Sbjct 433010 AGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAA-AGTGCG 433068
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
|| || || | ||||| ||||| |||| | ||||||||| || || || |||||
Sbjct 433069 TCCATCTTCCAGTTACTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTC 433128
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| || ||||| || || || || | ||| || || | ||| || ||||| ||
Sbjct 433129 CTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGT 433188
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| || || || | ||||| |||||||| |||||||||
Sbjct 433189 GATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 433231
>seq9145
Length=4041
Score = 111 bits (122), Expect = 2e-19
Identities = 160/223 (72%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| |||||| || || || ||||| ||||||||||||||||||| | ||| || |
Sbjct 280 AGTCTCAACACAAGATGAAGAGTGGACGCCTTTTGAATGTTGTAGTCAGACAA-AGTACG 338
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
|| || || || ||||| ||||| |||| | ||||||||| || || || |||||
Sbjct 339 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTC 398
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| | ||||| || || | || | ||| || || | ||| || ||||||||
Sbjct 399 CTTATTCTGAATCTTGGCCTTTATATTTTCTATTGTATCTGAGGGTTCAACCTCGAGAGT 458
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| || || || | ||||| |||||||| ||||| |||
Sbjct 459 GATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCTTG 501
>seq2520
Length=369870
Score = 111 bits (122), Expect = 2e-19
Identities = 160/223 (72%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| |||||| || || || ||||| ||||||||||||||||||| | ||| || |
Sbjct 184208 AGTCTCAACACAAGATGAAGAGTGGACGCCTTTTGAATGTTGTAGTCAGACAA-AGTACG 184150
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
|| || || || ||||| ||||| |||| | ||||||||| || || || |||||
Sbjct 184149 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTC 184090
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| | ||||| || || | || | ||| || || | ||| || ||||||||
Sbjct 184089 CTTATTCTGAATCTTGGCCTTTATATTTTCTATTGTATCTGAGGGTTCAACCTCGAGAGT 184030
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| || || || | ||||| |||||||| ||||| |||
Sbjct 184029 GATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCTTG 183987
>seq1
Length=12736304
Score = 105 bits (116), Expect = 7e-18
Identities = 147/202 (73%), Gaps = 3/202 (1%)
Strand=Plus/Plus
Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575
|| || |||||||||||||||||||| | ||| ||| | || || || || |||||
Sbjct 12236691 GTAGACTCCTTTTGAATGTTGTAGTCAGACAA-AGTGCGTCCATCTTCCAGTTGCTTGCC 12236749
Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635
||||| |||| | ||||||||| || || || ||||| || || ||||| || ||
Sbjct 12236750 AGCAAAGATCAGTCTCTGCTGATC-GGAGGAATTCCTTCCTTATCCTGAATCTTGGCCTT 12236808
Query 134636 GACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695
|| || | ||| || || | ||| || ||||| || ||||| || || || | ||
Sbjct 12236809 TACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCCGTAAGGGT 12236868
Query 134696 TTTAACGAAAATTTGCATTTTG 134717
||| |||||||| |||||||||
Sbjct 12236869 TTTCACGAAAATCTGCATTTTG 12236890
>seq371
Length=1453275
Score = 100 bits (110), Expect = 3e-16
Identities = 156/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|||| |||||| || || || ||||| |||||||||||| ||||||| | | || ||
Sbjct 449785 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACACAAAGTTTGT 449726
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| || || || ||||| | || ||| | ||||||||| || || || |||||
Sbjct 449725 CTGTCTTCCAGTTGCTTGCCAGTGAATATC--AGTCTGCTGATCAGGAGGAATTCCTTCC 449668
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || || || || | ||| | || ||||| || ||||||||
Sbjct 449667 TTATCCTGGATCTTGGCCTTTACATTTTCTACTGTACCTGAGGATTCAACCTCGAGAGTG 449608
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| || || | | ||||| || ||||| ||||| |||
Sbjct 449607 ATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCATCTTG 449566
>seq182
Length=1985155
Score = 89.7 bits (98), Expect = 5e-13
Identities = 155/223 (70%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| |||||| || || || || || |||||||||||||||||||| | ||| |||
Sbjct 1378985 AGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAA-AGTGCA 1379043
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
|| || || || ||||| ||||| |||| | ||||||||| || || || |||||
Sbjct 1379044 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTC 1379103
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| || ||||| || | || || | ||| | || | ||| | || || |
Sbjct 1379104 CTTATCCTGAATCTTGGCCTGTACATTTTCTATTGTACCCGAGGGTTCAGCCTCAAGGAT 1379163
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| || || || | ||||| | |||||| ||||| |||
Sbjct 1379164 GATGGTCTTCCCCGTAAGGGTTTTCAGGAAAATCTGCATCTTG 1379206
>seq541
Length=1170729
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| || || || || || || |||||||| || || ||| | || ||
Sbjct 610524 ACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 610583
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||||||||| || | | |||||| || || || ||||| ||||| |||||
Sbjct 610584 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGG 610643
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || || || || | ||||| | ||||| || || || ||||| ||
Sbjct 610644 ATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 610703
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| | || || ||||| || |||||||||
Sbjct 610704 CCGGTCAGGGTCTTCACGAAGATCTGCATTTTG 610736
>seq203
Length=1941613
Score = 86.0 bits (94), Expect = 6e-12
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 134562 TCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCT 134621
|| ||||||||||| |||||||||| ||||||||| || ||||| ||| | || || |||
Sbjct 1856030 TCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGTCCTCCTTGTCT 1856089
Query 134622 TGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTT 134681
|| ||||| |||||| || | ||||| | || || ||||| || ||| |
Sbjct 1856090 TGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGTTC 1856149
Query 134682 TTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || | || || ||||| || |||||
Sbjct 1856150 TTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 1856181
>seq377
Length=1354867
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || || || ||| || ||||| || || || || || || ||||| || || |
Sbjct 824403 CCACCCCTCAGGTGCAGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATCAGAA 824462
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || ||||| ||||||||||| || | | |||||| || || ||
Sbjct 824463 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 824522
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| ||||| ||||| || || || || || | ||||| | |||||
Sbjct 824523 ATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 824582
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || | ||||| || ||||||| || || ||||| || |||||||||
Sbjct 824583 TCCAGGGGGATGGTCTTGCCGGTTAGGGTCTTCACGAAGATCTGCATTTTG 824633
>seq788
Length=1000743
Score = 82.4 bits (90), Expect = 8e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| | ||| || ||||| || || || || || ||||| | || |
Sbjct 445006 AGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGG 445065
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||||||||| ||||||| || ||||||||| || ||||| ||||| ||
Sbjct 445066 CCATCTTCCAGCTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGGGATGCCCTCC 445125
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| ||||| ||||| |||||| || | ||||| | || || || || ||
Sbjct 445126 TTGTCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTG 445185
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || | || || || || || |||||
Sbjct 445186 ATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 445223
>seq304
Length=1579526
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/226 (69%), Gaps = 8/226 (4%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAG-TCGCCAACGGTGTG 134554
|||| |||||| || || || ||||| |||||||||||||||||| | | ||| |
Sbjct 417591 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGATGGACAAAG----T 417646
Query 134555 AGAGTCGT---CGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCC 134611
| | || | | || || ||||| ||||| |||| | ||||||||| | || || |
Sbjct 417647 ACATTCATCTCCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCACGAGGAATTTC 417706
Query 134612 TTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAG 134671
||| || || ||||| || || || || ||| | || | ||| || || ||
Sbjct 417707 TTCCTTATCCTGAATCTTGACCTTTACATTTTCTGTTGTAGCCGAGGGTTCAACCTCAAG 417766
Query 134672 AGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||| || || | ||| | ||||| |||||||| |||||||||
Sbjct 417767 AGTGATAGTCTACTTGGTAAGGGTTTTCACGAAAATCTGCATTTTG 417812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505292828591720
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