Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03- 29] 16,711 sequences; 3,156,902,762 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq54 98.7 8e-16 >seq54 Length=3562170 Score = 98.7 bits (108), Expect = 8e-16 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || ||||||||||| |||||||| ||||| || ||| || |||||||| || |||||| Sbjct 3279522 CCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACA 3279581 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAG 111881 || |||||||| || ||||| || || || |||||||| || || Sbjct 3279582 CCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGACAGGACAG 3279625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391865774276893