Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03- 29] 16,711 sequences; 3,156,902,762 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq878 86.0 7e-12 >seq878 Length=898115 Score = 86.0 bits (94), Expect = 7e-12 Identities = 96/123 (78%), Gaps = 4/123 (3%) Strand=Plus/Plus Query 59991 GCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTG-CTATTTTCTGGC 60048 |||||||| ||| ||||||||||||||||| ||||| || || || | | || ||||||| Sbjct 679034 GCTTTTGC-TGCTGTGGAAGGAATCTTCTTTTCTGGTTC-TTTTGCGTCAATATTCTGGC 679091 Query 60049 TCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACG 60108 |||| || || ||||| ||||| ||||| | || ||||| || || ||| | | || | Sbjct 679092 TCAAGAAACGCGGCCTGATGCCTGGCCTCACGTTTTCCAATGAACTTATTAGCAGAGATG 679151 Query 60109 AGG 60111 ||| Sbjct 679152 AGG 679154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548410220025840