Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03- 29] 16,711 sequences; 3,156,902,762 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq701 129 8e-25 >seq701 Length=996996 Score = 129 bits (142), Expect = 8e-25 Identities = 248/359 (69%), Gaps = 10/359 (3%) Strand=Plus/Minus Query 13683 GAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTC 13742 ||||||| ||||||||||| || || || || ||| | || ||||| || || ||| | Sbjct 244010 GAAGAGGAAGAGTTTCCCATAGCATATTCTATAGTGGTTCATCACAAAATTGAAATGCTT 243951 Query 13743 GAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCC 13802 || | |||||||| |||||||| || ||||| |||||||| | ||||||||| Sbjct 243950 GACAGGCTCCTGAGAGCCATCTATATGCCTCAGAATTTCTACTGCATTCACGTGGACAGA 243891 Query 13803 AAGTCCGGCGA--CGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACG 13860 ||||| | || | || ||| || | | | |||||| |||||| ||| | Sbjct 243890 AAGTCAGAGGATTCCTTTTTGGCCGCGGTGATT--GGCATCGCGTCCTGCTTCAGTAATG 243833 Query 13861 TGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCG 13920 | ||||| | |||| | |||||||| | ||| |||||||| || ||||||| Sbjct 243832 TCTTTGTGGCCAGTCAGCTGGAGAGTGTGGTGTATGCCTCGTGGAGTCGGGTTCAGGCCG 243773 Query 13921 ACCTCAGCTGCATGTCGGACCTGGAC-GCCTCCCCCGT-CA-AGTGGAGGTACCTGCTCA 13977 |||||| ||||||| ||||| || | | || || | |||| |||| || | | Sbjct 243772 ACCTCAACTGCATGCAAGACCTCTACAGGAT---GAGTGCAGACTGGAAGTACTTGATAA 243716 Query 13978 ACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAG 14036 | || ||||| ||||| || || | || ||||||||||| || || ||| ||| ||| Sbjct 243715 ATCTTTGCGGTATGGATTTTCCCATTAAAACCAACCTGGAAATTGTCCGGAAGCTCAAG 243657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658601597615360