Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq701 129 8e-25
>seq701
Length=996996
Score = 129 bits (142), Expect = 8e-25
Identities = 248/359 (69%), Gaps = 10/359 (3%)
Strand=Plus/Minus
Query 13683 GAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTC 13742
||||||| ||||||||||| || || || || ||| | || ||||| || || ||| |
Sbjct 244010 GAAGAGGAAGAGTTTCCCATAGCATATTCTATAGTGGTTCATCACAAAATTGAAATGCTT 243951
Query 13743 GAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCC 13802
|| | |||||||| |||||||| || ||||| |||||||| | |||||||||
Sbjct 243950 GACAGGCTCCTGAGAGCCATCTATATGCCTCAGAATTTCTACTGCATTCACGTGGACAGA 243891
Query 13803 AAGTCCGGCGA--CGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACG 13860
||||| | || | || ||| || | | | |||||| |||||| ||| |
Sbjct 243890 AAGTCAGAGGATTCCTTTTTGGCCGCGGTGATT--GGCATCGCGTCCTGCTTCAGTAATG 243833
Query 13861 TGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCG 13920
| ||||| | |||| | |||||||| | ||| |||||||| || |||||||
Sbjct 243832 TCTTTGTGGCCAGTCAGCTGGAGAGTGTGGTGTATGCCTCGTGGAGTCGGGTTCAGGCCG 243773
Query 13921 ACCTCAGCTGCATGTCGGACCTGGAC-GCCTCCCCCGT-CA-AGTGGAGGTACCTGCTCA 13977
|||||| ||||||| ||||| || | | || || | |||| |||| || | |
Sbjct 243772 ACCTCAACTGCATGCAAGACCTCTACAGGAT---GAGTGCAGACTGGAAGTACTTGATAA 243716
Query 13978 ACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAG 14036
| || ||||| ||||| || || | || ||||||||||| || || ||| ||| |||
Sbjct 243715 ATCTTTGCGGTATGGATTTTCCCATTAAAACCAACCTGGAAATTGTCCGGAAGCTCAAG 243657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658601597615360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |