Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq1818 132 3e-26
seq975 132 3e-26
seq1 132 3e-26
seq293 127 1e-24
seq9145 123 2e-23
seq2520 123 2e-23
seq371 107 1e-18
seq182 100 2e-16
seq788 98.7 7e-16
seq304 95.1 8e-15
seq541 91.5 1e-13
seq377 82.4 5e-11
>seq1818
Length=636242
Score = 132 bits (146), Expect = 3e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| |||||||| ||||| || || ||||| ||||| ||||| ||
Sbjct 433230 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 433171
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| || | |||| |||| || ||| || || ||||| | || || |||
Sbjct 433170 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 433111
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | | || ||||| ||||| |||||||||| | ||||||||| || |||
Sbjct 433110 CAGCAGAGACTGATCTTTGCTGGCAAGTAACTGGAAGATGGACGCACTTTGTCTGACTAC 433051
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
||||| ||||| ||||| || | ||| | || || ||
Sbjct 433050 AACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAG 433013
>seq975
Length=833997
Score = 132 bits (146), Expect = 3e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| |||||||| ||||| || || ||||| ||||| ||||| |
Sbjct 558717 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCG 558658
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| || | |||| |||| || ||| || || ||||| | || || |||
Sbjct 558657 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 558598
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | | || ||||| ||||| ||||||||||| | ||||||||| || |||
Sbjct 558597 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTAC 558538
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
||||| ||||| ||||| || | ||| | || || ||
Sbjct 558537 AACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAG 558500
>seq1
Length=12736304
Score = 132 bits (146), Expect = 3e-26
Identities = 150/200 (75%), Gaps = 1/200 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| |||||||| ||||| || || ||||| ||||| ||||| ||
Sbjct 12236889 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 12236830
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| || | |||| |||| || ||| || || ||||| | || || |||
Sbjct 12236829 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCC-GAT 12236771
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | | || ||||| ||||| ||||||||||| | ||||||||| || |||
Sbjct 12236770 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTAC 12236711
Query 23788 AACATACAAAAAGAGTCCAC 23807
||||| ||||| ||||| ||
Sbjct 12236710 AACATTCAAAAGGAGTCTAC 12236691
>seq293
Length=1771812
Score = 127 bits (140), Expect = 1e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| ||||| || | ||| || || ||||||||||| | ||| ||
Sbjct 533871 AAGATGCAGATTTTCGTGAAAACTCTTATGGGGAAGACCATCACTCTCGAGGCTGAACCC 533930
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| || | |||| |||| || ||| || || ||||| | || || |||
Sbjct 533931 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 533990
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | || || ||||| ||||| ||||||||||| | ||||||| | || |||
Sbjct 533991 CAGCAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTCTGTCTGACTAC 534050
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
|||| ||||| |||||||| | ||| | || |||||
Sbjct 534051 AACACTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAG 534088
>seq9145
Length=4041
Score = 123 bits (136), Expect = 2e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| |||||||| ||||| || || ||||||||||| ||||| ||
Sbjct 500 AAGATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCC 441
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| || || | |||| |||| || ||| | || ||||| | || || |||
Sbjct 440 TCAGATACAATAGAAAATATAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGAT 381
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | | || ||||| ||||| ||||||||||| | ||| ||||| || |||
Sbjct 380 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 321
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
||||| ||||| | |||||| | ||| | || || ||
Sbjct 320 AACATTCAAAAGGCGTCCACTCTTCATCTTGTGTTGAG 283
>seq2520
Length=369870
Score = 123 bits (136), Expect = 2e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| |||||||| ||||| || || ||||||||||| ||||| ||
Sbjct 183988 AAGATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCC 184047
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| || || | |||| |||| || ||| | || ||||| | || || |||
Sbjct 184048 TCAGATACAATAGAAAATATAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGAT 184107
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | | || ||||| ||||| ||||||||||| | ||| ||||| || |||
Sbjct 184108 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 184167
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
||||| ||||| | |||||| | ||| | || || ||
Sbjct 184168 AACATTCAAAAGGCGTCCACTCTTCATCTTGTGTTGAG 184205
>seq371
Length=1453275
Score = 107 bits (118), Expect = 1e-18
Identities = 155/218 (71%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| ||||||||||| || |||||||| | ||| || || ||||||||||| ||||| |||
Sbjct 449567 AAGATGCAGATTTTTGTGAAAACCCTTATGGGGAAGACCATCACTCTCGAGGTTGAATCC 449626
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| | || || |||| |||| || || || || ||||| | || || |||
Sbjct 449627 TCAGGTACAGTAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 449686
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | | ||||| | ||||| |||||||||||| || ||||| | || |||
Sbjct 449687 CAGCA--GACTGATATTCACTGGCAAGCAACTGGAAGACAGACAAACTTTGTGTGACTAC 449744
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
| ||| ||||| |||||||| | ||| | || || ||
Sbjct 449745 AGCATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAG 449782
>seq182
Length=1985155
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||| | |||||||| ||||| || || |||| || || | ||| ||
Sbjct 1379205 AAGATGCAGATTTTCCTGAAAACCCTTACGGGGAAGACCATCATCCTTGAGGCTGAACCC 1379146
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
||| || | |||| || | || ||| || || ||||| | || || |||
Sbjct 1379145 TCGGGTACAATAGAAAATGTACAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 1379086
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | | || ||||| ||||| ||||||||||| | | ||||||| || |||
Sbjct 1379085 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGCACTTTGTCTGACTAC 1379026
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
||||| ||||| ||||| || | ||| | || || ||
Sbjct 1379025 AACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAG 1378988
>seq788
Length=1000743
Score = 98.7 bits (108), Expect = 7e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || ||||| ||||| || || ||||| || || || || |||
Sbjct 445223 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 445164
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | ||| | |||| | ||||| || || | ||||| || ||
Sbjct 445163 GACACCATTGAGAATGTCAAAGCCAAAA-TCCAAGACAAGGAGGGCATCCCGCCTGACCA 445105
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | | ||||| |||||||| |||||||| | || ||| | || || ||
Sbjct 445104 GCAGCGTCTGGTTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATAA 445045
Query 23790 CATACAAAAAGAGTCCAC 23807
|| || |||||||||||
Sbjct 445044 TATCCAGAAAGAGTCCAC 445027
>seq304
Length=1579526
Score = 95.1 bits (104), Expect = 8e-15
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| |||||||| || | || |||||||| || ||||| ||
Sbjct 417811 AAAATGCAGATTTTCGTGAAAACCCTTACCAAGTAGACTATCACTCTTGAGGTTGAACCC 417752
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
||| || |||| |||| || ||| || || |||| | || | |||
Sbjct 417751 TCGGCTACAACAGAAAATGTAAAGGTCAAGATTCAGGATAAGGAAGAAATTCCTCGTGAT 417692
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGAT-TA 23786
|| ||| | | || ||||| ||||| ||||||| ||| ||| | ||||| | | || ||
Sbjct 417691 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGGAGATGAATGTACTTT-GTCCATCTA 417633
Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
|||||| ||||| |||||||| | ||| | || || ||
Sbjct 417632 CAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAG 417594
>seq541
Length=1170729
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||| ||||| || ||||| || || || || ||||| || || || || ||
Sbjct 610735 AAAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 610676
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| ||||| | |||| | || || || || ||||| || | || || ||
Sbjct 610675 AGTGACACCATCGAAAACGTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGAC 610616
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | | || ||||| ||||| || |||||||| | |||||| | ||||||
Sbjct 610615 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTAC 610556
Query 23788 AACATACAAAAAGAGTCCAC 23807
||||| || |||||||| ||
Sbjct 610555 AACATCCAGAAAGAGTCAAC 610536
>seq377
Length=1354867
Score = 82.4 bits (90), Expect = 5e-11
Identities = 138/200 (69%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||| ||||| || ||||| || || || || ||| | || || || || ||
Sbjct 824632 AAAATGCAGATCTTCGTGAAGACCCTAACCGGCAAGACCATCCCCCTGGAGGTGGAGCCC 824573
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| ||||| | |||| | || || || || ||||| || | || || ||
Sbjct 824572 AGTGACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGAC 824513
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | | || ||||| ||||| || |||||||| | |||||| | |||||
Sbjct 824512 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTAT 824453
Query 23788 AACATACAAAAAGAGTCCAC 23807
||||| || |||||||| ||
Sbjct 824452 AACATCCAGAAAGAGTCGAC 824433
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337940759169188
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |