Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq54 163 2e-35
>seq54
Length=3562170
Score = 163 bits (180), Expect = 2e-35
Identities = 135/165 (82%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773
|| || |||| ||| || |||||||| ||||| || | ||||||||| ||||| ||||||
Sbjct 3279519 AGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGC 3279578
Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833
|| || || ||||||||||| ||||||||||| ||||| || || ||||| |||| |
Sbjct 3279579 ACACCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGACAGGACAGCTCGCCGTTCACC 3279638
Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878
||||| ||||| || | ||||||||||||||| |||||||| |||
Sbjct 3279639 ACGTAGAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCATCAGA 3279683
Score = 84.2 bits (92), Expect = 2e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
|||||||||||||| || || || || || || | || |||||||| |||| |||
Sbjct 3282074 AAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCCTCTTCTCTGTTGGAGAAT 3282133
Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136
||| ||||||| ||||||| || || ||||| |||||||| || || |||||
Sbjct 3282134 CCCAGGCTGTCCAAGAAGTCTCGAGACCCATTGGCATCCCAGATTTTCACTCCCTTTGAA 3282193
Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162
|| || || || | |||||| || ||
Sbjct 3282194 GACAGTTCCTTAGCGTTTGTAGATCC 3282219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406080478644946
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |