Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq54 147 2e-30
>seq54
Length=3562170
Score = 147 bits (162), Expect = 2e-30
Identities = 131/164 (80%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267
|| || |||| ||| || |||||||| ||||| || | ||||||||| ||||| |||||
Sbjct 3279519 AGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGC 3279578
Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327
|| || || ||||||||||||||||||||||| |||||||| || ||||| || |
Sbjct 3279579 ACACCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGACAGGACAGCTCGCCGTTCACC 3279638
Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371
||||| ||||| || | ||| ||||||||||| || ||||| ||
Sbjct 3279639 ACGTAGAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCATCAG 3279682
Score = 91.5 bits (100), Expect = 1e-13
Identities = 116/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 27497 TGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTT 27556
|||| ||||| || ||||||||||| || || || || || || || | || |||||||
Sbjct 3282060 TGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCCTCTT 3282119
Query 27557 CCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCT 27616
| |||| ||| ||| ||||||| ||||||| || || ||||| |||||||| |
Sbjct 3282120 CTCTGTTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGAGACCCATTGGCATCCCAGATTT 3282179
Query 27617 TTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656
| || ||||| || || || || | |||||| || ||
Sbjct 3282180 TCACTCCCTTTGAAGACAGTTCCTTAGCGTTTGTAGATCC 3282219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369431944200641
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |