Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq1818 154 4e-32
seq975 154 4e-32
seq541 152 1e-31
seq377 149 2e-30
seq9145 145 2e-29
seq2520 145 2e-29
seq293 140 8e-28
seq182 131 4e-25
seq1 131 4e-25
seq176 116 9e-21
seq304 109 1e-18
seq203 109 1e-18
seq124 95.1 3e-14
seq496 93.3 1e-13
>seq1818
Length=636242
Score = 154 bits (170), Expect = 4e-32
Identities = 169/224 (75%), Gaps = 3/224 (1%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | |||||||||||||| || || || || || |||||||||||||| |||
Sbjct 433230 AAAATGC---AGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAA 433174
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||| || || || || || || || ||||||||||| || |||||||| |||||
Sbjct 433173 CCCTCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCT 433114
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| ||||| |||| ||||| || || || | || ||||||||| | ||| | | ||
Sbjct 433113 GATCAGCAGAGACTGATCTTTGCTGGCAAGTAACTGGAAGATGGACGCACTTTGTCTGAC 433054
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| ||| | ||||| || || || || |||||||| ||||||||
Sbjct 433053 TACAACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 433010
>seq975
Length=833997
Score = 154 bits (170), Expect = 4e-32
Identities = 169/224 (75%), Gaps = 3/224 (1%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | |||||||||||||| || || || || || |||||||||||||| |||
Sbjct 558717 AAAATGC---AGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAA 558661
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| || || || || || || || ||||||||||| || |||||||| |||||
Sbjct 558660 CCGTCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCT 558601
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| ||||| |||| ||||| || || || || || ||||||||| | ||| | | ||
Sbjct 558600 GATCAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGAC 558541
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| ||| | ||||| || || || || |||||||| ||||||||
Sbjct 558540 TACAACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 558497
>seq541
Length=1170729
Score = 152 bits (168), Expect = 1e-31
Identities = 169/223 (76%), Gaps = 7/223 (3%)
Strand=Plus/Minus
Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969
|||| ||||||| | || |||||||| || || || || || || |||||||| ||||
Sbjct 610740 AGGTCAAAATGC---AGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGG 610684
Query 177970 TGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027
|||| || ||| |||||||||| ||||| || ||||| || || ||||| || ||
Sbjct 610683 TGGA--GCCCAGTGACACCATCGAAAACGTGAAGGCCAAGATCCAAGATAAAGAGGGCAT 610626
Query 178028 CCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087
||| || |||||||| | || ||||| || || || ||||| |||||||| | |||||
Sbjct 610625 CCCCCCTGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCT 610566
Query 178088 TGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130
| | ||||| ||| |||| ||||| ||||| || || || |||
Sbjct 610565 TTCTGATTACAACATCCAGAAAGAGTCAACTCTCCACCTGGTT 610523
>seq377
Length=1354867
Score = 149 bits (164), Expect = 2e-30
Identities = 170/226 (75%), Gaps = 7/226 (3%)
Strand=Plus/Minus
Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969
|||| ||||||| | || |||||||| || || || || || || ||| |||| ||||
Sbjct 824637 AGGTCAAAATGC---AGATCTTCGTGAAGACCCTAACCGGCAAGACCATCCCCCTGGAGG 824581
Query 177970 TGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027
|||| || ||| |||||||||| || || || ||||| || || ||||| || ||
Sbjct 824580 TGGA--GCCCAGTGACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAGGGCAT 824523
Query 178028 CCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087
||| || |||||||| | || ||||| || || || ||||| |||||||| | |||||
Sbjct 824522 CCCCCCTGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCT 824463
Query 178088 TGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTG 178133
| | ||||||||| |||| ||||| || || ||||| || ||| ||
Sbjct 824462 TTCTGATTATAACATCCAGAAAGAGTCGACCCTGCACCTGGTTCTG 824417
>seq9145
Length=4041
Score = 145 bits (160), Expect = 2e-29
Identities = 161/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| || || || || || ||||| |||||||| ||| ||||||
Sbjct 494 CAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCAGAT 435
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || | || ||||||||| | || |||||||| ||||| || |||||
Sbjct 434 ACAATAGAAAATATAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGATCAGCAG 375
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| ||||| || || || || || ||||||||| | ||| | | || || ||| |
Sbjct 374 AGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATT 315
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||| | || || || |||||||| ||||||||
Sbjct 314 CAAAAGGCGTCCACTCTTCATCTTGTGTTGAGACT 280
>seq2520
Length=369870
Score = 145 bits (160), Expect = 2e-29
Identities = 161/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| || || || || || ||||| |||||||| ||| ||||||
Sbjct 183994 CAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCAGAT 184053
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || | || ||||||||| | || |||||||| ||||| || |||||
Sbjct 184054 ACAATAGAAAATATAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGATCAGCAG 184113
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| ||||| || || || || || ||||||||| | ||| | | || || ||| |
Sbjct 184114 AGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATT 184173
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||| | || || || |||||||| ||||||||
Sbjct 184174 CAAAAGGCGTCCACTCTTCATCTTGTGTTGAGACT 184208
>seq293
Length=1771812
Score = 140 bits (154), Expect = 8e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||||||||| | || || || ||||| ||||||| ||| ||| ||
Sbjct 533877 CAGATTTTCGTGAAAACTCTTATGGGGAAGACCATCACTCTCGAGGCTGAACCCTCGGAT 533936
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || ||||||||||| || |||||||| ||||| || |||||
Sbjct 533937 ACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGCAG 533996
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || || || || ||||||||| | ||||| | || || |||
Sbjct 533997 AGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTCTGTCTGACTACAACACT 534056
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||| || || || || |||||||| || |||||
Sbjct 534057 CAAAAGGAGTCCACTCTTCATCTTGTGTTAAGACT 534091
>seq182
Length=1985155
Score = 131 bits (144), Expect = 4e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||| ||||||| || || || || || |||| ||| |||| ||| ||| |
Sbjct 1379199 CAGATTTTCCTGAAAACCCTTACGGGGAAGACCATCATCCTTGAGGCTGAACCCTCGGGT 1379140
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || | ||||||||||| || |||||||| ||||| || |||||
Sbjct 1379139 ACAATAGAAAATGTACAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGCAG 1379080
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| ||||| || || || || || ||||||||| | ||| | | || || ||| |
Sbjct 1379079 AGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGCACTTTGTCTGACTACAACATT 1379020
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||| || || || || |||||||| ||||||||
Sbjct 1379019 CAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 1378985
>seq1
Length=12736304
Score = 131 bits (144), Expect = 4e-25
Identities = 152/203 (75%), Gaps = 4/203 (2%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | |||||||||||||| || || || || || |||||||||||||| |||
Sbjct 12236889 AAAATGC---AGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAA 12236833
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||| || || || || || || || ||||||||||| || |||||||| |||||
Sbjct 12236832 CCCTCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCC- 12236774
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| ||||| |||| ||||| || || || || || ||||||||| | ||| | | ||
Sbjct 12236773 GATCAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGAC 12236714
Query 178095 TATAACGTCCAAAAAGAATCAAC 178117
|| ||| | ||||| || || ||
Sbjct 12236713 TACAACATTCAAAAGGAGTCTAC 12236691
>seq176
Length=2148545
Score = 116 bits (128), Expect = 9e-21
Identities = 151/205 (74%), Gaps = 8/205 (4%)
Strand=Plus/Plus
Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969
||||| |||||| | || ||| |||| || || || | || || |||||||| ||||
Sbjct 212213 AGGTTGAAATGC---AGATCTTCATGAAGACCCTGACCAGCAAGACCATCACCCTGGAGG 212269
Query 177970 TGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAA-GAAGGAA 178026
|||| || ||| |||||||||| || || || ||||| ||||| ||| || || |
Sbjct 212270 TGGA--GCCCAGTGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAAGGAGGGCA 212327
Query 178027 TCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTC 178086
|||| | |||||| | | || ||||| ||| | || ||||| |||||||| | ||||
Sbjct 212328 TCCCCCATGACCAGGAGAGGCTCATCTTTGCCAGCAAGCAGCTGGAAGATGGCCGCACTC 212387
Query 178087 TTGCCGATTATAACGTCCAAAAAGA 178111
|| | ||||| ||| |||| |||||
Sbjct 212388 TTTCTGATTACAACATCCAGAAAGA 212412
>seq304
Length=1579526
Score = 109 bits (120), Expect = 1e-18
Identities = 161/225 (72%), Gaps = 5/225 (2%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | |||||||||||||| || || | || ||||| || ||||| |||
Sbjct 417811 AAAATGC---AGATTTTCGTGAAAACCCTTACCAAGTAGACTATCACTCTTGAGGTTGAA 417755
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||| | || | || || || || ||||||||||| || |||| ||| ||||
Sbjct 417754 CCCTCGGCTACAACAGAAAATGTAAAGGTCAAGATTCAGGATAAGGAAGAAATTCCTCGT 417695
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| ||||| |||| ||||| || || || || || | ||||| | | ||| ||| | ||
Sbjct 417694 GATCAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGGAGATGAATGTACT-TTGTCCAT 417636
Query 178095 -TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| ||| | ||||| || || || || |||||||| ||||||||
Sbjct 417635 CTACAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 417591
>seq203
Length=1941613
Score = 109 bits (120), Expect = 1e-18
Identities = 151/207 (73%), Gaps = 7/207 (3%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981
|| || |||||||| || || || || || | |||||||||||||| | ||| || |
Sbjct 1856178 CAGATCTTCGTGAAGACCCTGACGGGCAAGAACATCACCCTCGAGGTTG--AGCCCAGTG 1856121
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||| |||||| || || || ||||| || | ||||| || |||||||
Sbjct 1856120 ACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGACATCCCGCCTGACCAGC 1856061
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || || || || || || |||||||| |||| ||| | || || | || |||||
Sbjct 1856060 AGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGCTGGCCGTACCCTGTCAGACTATAATA 1856001
Query 178102 TCCAAAAAGAATCAACACTGCATCTTG 178128
||| | ||| || || ||||| ||||
Sbjct 1856000 TCC--AGAGAGTCCACCCTGCA-CTTG 1855977
>seq124
Length=2465673
Score = 95.1 bits (104), Expect = 3e-14
Identities = 99/130 (76%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| || || || || || ||||| || ||||| ||| ||||||
Sbjct 2104770 CAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTTGAGGTTGAACCCTCAGAT 2104711
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || ||||||||||| || |||||||| ||||| || ||||
Sbjct 2104710 ACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATGAGCAG 2104651
Query 178044 CGACTTATCT 178053
|||| ||||
Sbjct 2104650 GGACTGATCT 2104641
>seq496
Length=1197557
Score = 93.3 bits (102), Expect = 1e-13
Identities = 145/205 (71%), Gaps = 3/205 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || | ||| || || || || || || ||||||||||||||||| | | |||
Sbjct 1032815 CAGATCTTTGAGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGCCCACTGAC 1032756
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||| ||||| |||||| || || |||||||| || || |||| || |||| ||
Sbjct 1032755 ACCACTGAGAATGTCAAAGCCAACATCCAGGACAAGGAGGGCATCCTGCCTGACCTGCTG 1032696
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || || | | || ||||||| |||||||| | ||| | |||| || || ||
Sbjct 1032695 CATCTGATTTCTGTGGGTGAACAGCTGGAAGATGGCGGCACTGT--CCGACTACAATATC 1032638
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| | ||| || || ||||| ||||
Sbjct 1032637 CAGAGAGAGTCCACCCTGCA-CTTG 1032614
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203473469488934
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |