Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq541 102 8e-17
seq377 98.7 9e-16
seq3096 86.0 6e-12
>seq541
Length=1170729
Score = 102 bits (112), Expect = 8e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| || || || ||| ||||| ||||| || || || || ||||| | || ||
Sbjct 610524 ACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 610583
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||||||||| || || || || | ||| ||||| | ||| | || ||| || || |
Sbjct 610584 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGG 610643
Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832
|| || |||| ||| | | ||||| || | ||||||||||| || || || ||
Sbjct 610644 ATCTTGGCCTTC-ACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTT 610702
Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|| ||||| ||||| ||||| |||||||| ||
Sbjct 610703 GCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 610735
>seq377
Length=1354867
Score = 98.7 bits (108), Expect = 9e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| ||||| || ||| ||||| |||||||| || || || ||||| | || ||
Sbjct 824421 ACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATCAGAAAGAGTGCGGCCATCTTCC 824480
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||||||||| || || || || | ||| ||||| | ||| | || ||| || || |
Sbjct 824481 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGG 824540
Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833
|| || ||||| | ||||| || | ||||||||||| | || || ||
Sbjct 824541 ATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGGGATGGTCTTG 824600
Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|| || || ||||| ||||| |||||||| ||
Sbjct 824601 CCGGTTAGGGTCTTCACGAAGATCTGCATTTT 824632
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
||||| || || || ||| ||||| || || || || || || ||||| | || ||
Sbjct 824193 ACCAGGTGGAGAGTTGACTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCTTCC 824252
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
| |||||||| ||| || || || | ||| ||||| | ||| | || ||| || | |
Sbjct 824253 ATCTGCTTGCTGGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATATTGG 824312
Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833
|| || ||||| | ||||| || | ||||||||||| || || || ||
Sbjct 824313 ATATTCGCCTTCACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 824372
Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| || || ||||| ||||| |||||||||
Sbjct 824373 CCGGTTAGGGTCTTCACGAAGATCTGCATG 824402
>seq3096
Length=280261
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/213 (69%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712
||||| ||||| ||| ||| | ||| || || ||||| ||||| ||||| | || |
Sbjct 94306 CACCAAGTGCAGGGTGAGCTCTTCCTGGATATTGTAGTCTGAGAGAGTGCGGCCATCCTT 94365
Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772
||| | ||||| |||| ||||| | ||| ||||| | || ||||||||||| | | |
Sbjct 94366 CAGCGGTTTGCCCACGAAAATCAGACACTGCTGGTCAGGTGGGACGCTCTCCTTAT-CTT 94424
Query 41773 GATTTTTTGCTTCAACGACGACACA---GTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829
| |||| |||| || | || ||||| || | ||| ||||||| | || ||
Sbjct 94425 GGATTTTGGCTTTGACATTCTCTCACTGGTGTCACTGGGCTCAACCTCCAGGTTGATGGT 94484
Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || |||| ||||| |||| ||| ||||
Sbjct 94485 CTTGCCTATCAGGGTCTTCGCGAAGATCGGCAT 94517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462207430473200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |