Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq29765 91.5 3e-13
seq11162 91.5 3e-13
seq18780 89.7 1e-12
seq17541 89.7 1e-12
>seq29765
Length=860368
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 657518 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 657577
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 657578 CCCCACGTTGGGC 657590
>seq11162
Length=4512454
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 1726480 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1726421
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 1726420 CCCCACGTTGGGC 1726408
>seq18780
Length=4957292
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 389844 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 389903
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 389904 CCCACGTTGGGC 389915
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||| |
Sbjct 399745 GCCCGACTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGACC 399686
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 399685 CCCACGTTGGGC 399674
>seq17541
Length=988023
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 18793 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 18734
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 18733 CCCACGTTGGGC 18722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057407735347190
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |