Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq23530 109 6e-19
seq15277 105 7e-18
>seq23530
Length=2024980
Score = 109 bits (120), Expect = 6e-19
Identities = 201/295 (68%), Gaps = 0/295 (0%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || || || |||| || ||||||||||| || |||||||| |||||||| || ||
Sbjct 954725 ATGTAAGTGTCAGTGAGGAGACTGTACATTTCAGAATGTATGTTTTCCATGGCAATTTGG 954784
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| || || ||| | |||||||||| || |||||||| | | || ||| | |
Sbjct 954785 AAGCCATAGAAGTAACGGGCTTCCGTAATCTGAACTTCTTGGCTAAGCCGCTCCACCAAG 954844
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413
||||| || || ||||| || || || || | || |||| | | | | ||||||||
Sbjct 954845 TTTTCATTTACTATGCCATCACTTGCTGCAGAGAAAGCCAGAACACGTGAAGTGAAATAT 954904
Query 17414 TTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCG 17473
| || || || | || | ||||| || | || ||||| | ||||| || ||
Sbjct 954905 CTCTCCTCAGGCTTCAGGGCTTCCCAGTGCTGAATGTCCTTGGAAAGGTCCACCTCCTCA 954964
Query 17474 GGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATT 17528
| ||||| || |||| | || || |||||| | ||||| |||| |||||
Sbjct 954965 GCTGTCCAGAAGGAAGCCTCCGCTTTCCTATACACCTGCCAAACATCACGGTATT 955019
>seq15277
Length=4737824
Score = 105 bits (116), Expect = 7e-18
Identities = 96/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045
||||||||||||| |||||||| || |||||||| | ||||||||| ||||||||| |
Sbjct 3367420 CCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTT 3367479
Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105
| | ||| ||||||| || || || ||||||||||| || || || || | ||||| |
Sbjct 3367480 TGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCGGCAAAGG 3367539
Query 17106 C 17106
|
Sbjct 3367540 C 3367540
Score = 87.8 bits (96), Expect = 2e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || || || ||||| || || |||||||| || ||||||||||||||||| || ||
Sbjct 3369383 ATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTCTCCATGGCAATTTGG 3369442
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC 17331
|| || || || || |||||||||| || ||||||||
Sbjct 3369443 AAGCCATAGAAACAACGGGCTTCCGTAATCTGAACTTC 3369480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517346907774840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |