Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq23530 122 9e-23
seq20974 114 1e-20
seq15277 98.7 1e-15
>seq23530
Length=2024980
Score = 122 bits (134), Expect = 9e-23
Identities = 216/313 (69%), Gaps = 4/313 (1%)
Strand=Plus/Plus
Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531
|| || || ||| | || | |||||||||||| || |||||||| || ||||| || ||
Sbjct 954725 ATGTAAGTGTCAGTGAGGAGACTGTACATTTCAGAATGTATGTTTTCCATGGCAATTTGG 954784
Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591
|| ||||||||| | || || |||| || || ||||| | || || ||| ||| |
Sbjct 954785 AAGCCATAGAAGTAACGGGCTTCCGTAATCTGAACTTCTTGGCTAAGCCGCTCCACCAAG 954844
Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCC--AATATGTGCTTAATGAAAT 16649
|| ||||| || || || |||||||| ||| | || ||| || | ||| | ||||||
Sbjct 954845 TTTTCATTTACTATGCCATCACTTGCTGCAGAGAAAGCCAGAACACGTG--AAGTGAAAT 954902
Query 16650 ATTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTT 16709
|| | || |||| | || | ||| | | | || ||||| | ||||| || |
Sbjct 954903 ATCTCTCCTCAGGCTTCAGGGCTTCCCAGTGCTGAATGTCCTTGGAAAGGTCCACCTCCT 954962
Query 16710 CTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTA 16769
| | ||||| ||| |||| | || || |||||| | ||||| |||| ||||| |
Sbjct 954963 CAGCTGTCCAGAAGGAAGCCTCCGCTTTCCTATACACCTGCCAAACATCACGGTATTCCA 955022
Query 16770 TGGGAAATACGAC 16782
| ||||| | |||
Sbjct 955023 TAGGAAAGATGAC 955035
>seq20974
Length=1049469
Score = 114 bits (126), Expect = 1e-20
Identities = 98/121 (81%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283
|||| ||||||||||| ||||| ||||||||||| | || ||||| ||||| |||||
Sbjct 250903 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGTCCTCTTTTCT 250962
Query 16284 TTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAG 16343
||| ||||||||| |||||||| || ||||| ||||| || || || |||| ||||| |
Sbjct 250963 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 251022
Query 16344 C 16344
|
Sbjct 251023 C 251023
Score = 84.2 bits (92), Expect = 2e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 15925 AACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCCATAAAATCAAA 15984
||| ||||| || ||||| || ||||| ||||||||||| || |||||||||||||||||
Sbjct 234139 AACTCGTTTCTCAAAGAAATTTGTTTTCCCCTCTAAAGAAATGTTTTCCATAAAATCAAA 234198
Query 15985 GGGATT 15990
||||||
Sbjct 234199 GGGATT 234204
>seq15277
Length=4737824
Score = 98.7 bits (108), Expect = 1e-15
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285
||||||||||| |||||||| |||||||| || | || ||||| ||||||||| ||
Sbjct 3367422 TCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTTTTG 3367481
Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344
| ||||||||||| ||||| || || |||||||| || || || || | ||||| ||
Sbjct 3367482 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCGGCAAAGGC 3367540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511218061619160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |