Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31] 30,713 sequences; 2,429,212,129 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq17408 104 2e-17 >seq17408 Length=748846 Score = 104 bits (114), Expect = 2e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 18960 GATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAAC 19019 ||| |||| | |||| |||||||| || ||| | | || ||||||||||| | ||| Sbjct 535938 GATCTCCCTCTCATGGCCCTACCTCCGTGCCACGCCCTTTGCCAGTTTTACGTGGTGAAC 535879 Query 19020 GGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTC 19079 ||||| | |||||||| | |||||||| || || || |||||||| || || || ||| Sbjct 535878 GGTGAGCTGTCCTGCCAGCTGTACCAGAGGTCAGGAGACATGGGCCTGGGTGTGCCCTTC 535819 Query 19080 AACATTGCTGGATATGCACTTCTTACCTACAT 19111 ||||| || | || || || || |||||||| Sbjct 535818 AACATCGCCAGCTACGCCCTGCTCACCTACAT 535787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399354459785085