Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq1322 289 3e-73
seq13862 181 1e-40
seq24272 168 8e-37
seq8154 129 7e-25
seq2791 120 4e-22
>seq1322
Length=1818447
Score = 289 bits (320), Expect = 3e-73
Identities = 267/338 (79%), Gaps = 0/338 (0%)
Strand=Plus/Plus
Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116
|||||||| |||||||| ||||| | | | | |||| | ||||| |||||||||||||
Sbjct 1464252 AGCAGGGCTTCGATGTCAGGCTCGATGTCGATGGTCAGAAAGCGGCGGCTGTACCTGCGT 1464311
Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176
|||||| ||||| | ||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 1464312 ACGGGCACACCGTCTGGGCCCACCAGGAACTTCTCGAAGTTCCAGGCAACGTCGTTGCGG 1464371
Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236
||||| |||||||||| |||| || |||||| ||| ||| | | |||||| |||
Sbjct 1464372 CACACCGGAGACCAGGTGATGAACTTGGGGTCTGTCATGAGGGCAGTGGCGTCGTCACTA 1464431
Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296
|||| ||||| ||||| || ||||| | |||||||||||| ||| | | || || |||
Sbjct 1464432 GGCGTGGGCAGAGCCTCCCGAAGGAAAGTGAAGAGCGGATGCGCCTTCTCGCCATTCACC 1464491
Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356
|| ||||||||||||||||| ||||| |||||||| ||| || || || |||| |||
Sbjct 1464492 TCACACTTCTCGAAGAGCATGAAGTTGGGCTCGAACCCGCCGCCTGGTCGTACGTACTTG 1464551
Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTG 83394
||| || || |||||| | |||| ||| ||||||||
Sbjct 1464552 AGGCAATTCAGGATCTCCTCGTTCTTGGCATTTTCCTG 1464589
Score = 188 bits (208), Expect = 9e-43
Identities = 181/232 (78%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450
|||| || || |||||||| |||||||| || ||||| ||||| ||||| | || ||||
Sbjct 1464865 CCTGATGCCCAAACTGGTTGCACGGGAAGCCGAGCACGACCAGGCCCCGGGGCCCGAGGC 1464924
Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510
|||||||||| || |||||||| ||||| |||||||| || | |||||||| ||||| |
Sbjct 1464925 GCCGCTGCAGGTCATTCATCTGGGTGTAGTCCCGGACAGTTGTGCCTCAGAGCGACGCCA 1464984
Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGG 83570
| ||||| ||||||| ||| |||||| | | | |||||| ||||||| || || ||||
Sbjct 1464985 CATTCTCAATGAGCAGTACCTTGCCCCGAAGGGACCCTAAGTTCACAGGCTCCCCGCCGG 1465044
Query 83571 TAATCGGGCGTGCTGAGAAGGCGTACACAGATCTGGTCTCTGCCGCGGCAAG 83622
| ||| || || |||||||||||||| || | | | |||| || || ||
Sbjct 1465045 CCAGCGGACGCGCAGAGAAGGCGTACACCGAGCGCGGCGCTGCTGCCGCCAG 1465096
>seq13862
Length=6458357
Score = 181 bits (200), Expect = 1e-40
Identities = 262/370 (71%), Gaps = 11/370 (3%)
Strand=Plus/Plus
Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236
||||| |||||||||| |||| || ||||| | | ||| | | | || | ||
Sbjct 2120258 CACACCAGAGACCAGGCGATGAACTTGGGGTTGGCCCTGAGGGCAGTGGCGGCGACACTG 2120317
Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296
|||| ||||| ||||| || |||||| |||||||||| | ||| | || || |||
Sbjct 2120318 GGCGTGGGCAGAGCCTCGCGAAGGAAGACGAAGAGCGGGTACGCCTGCGAGCCATTCACC 2120377
Query 83297 TCGCACTTCTC--------GAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGA 83348
|||| |||||| ||||||||| ||||| |||||||| | || || || | ||
Sbjct 2120378 TCGCGCTTCTCCGCTCCTCGAAGAGCATGAAGTTGGGCTCGAACCTATTGCCTGGTCTGA 2120437
Query 83349 CGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGACCGAACTGGT 83408
||| ||| ||| || || ||||||| || ||||||| ||||| || || ||| |||
Sbjct 2120438 CGTACTTGAGGCAATTCAGGATCTCG---TTTGGGGCGTTCTCCTGATGCCCAAACCGGT 2120494
Query 83409 TACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGCGCCGCTGCAGCTCGTTCA 83468
| || | ||| | ||||| ||||| || || | || ||||||||| |||| | ||||
Sbjct 2120495 TGCAAGCGAAGCTGAGCACGACCAGGCCTCGGGGCCCGAGGCGCCGCCTCAGCACTTTCA 2120554
Query 83469 TCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTACGTTCTCGATGAGCAAGA 83528
||| |||| ||| |||||| | |||| ||| || || | | ||| ||||||| |
Sbjct 2120555 CCTGTGTGTCATCCTGGACCGCTGTGCCTCCGAGCGATGCCAACTCCTCAATGAGCAGGG 2120614
Query 83529 CCCGGCCCCG 83538
||| ||||||
Sbjct 2120615 CCCTGCCCCG 2120624
>seq24272
Length=5722674
Score = 168 bits (186), Expect = 8e-37
Identities = 244/343 (71%), Gaps = 5/343 (1%)
Strand=Plus/Minus
Query 83052 GGGGGAGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACC 83111
|||| |||||| | |||| | | | ||| | | | |||||| | ||||| ||||||||
Sbjct 3303853 GGGGCAGCAGGCCTTCGAAGGCAGCCTCGAGGTCGAGGGTCAGAAAGCGGCGGCTGTACG 3303794
Query 83112 TGCGCACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGT 83171
|| |||||| | ||||| | ||||||| || ||||| |||||||||||| ||||||
Sbjct 3303793 TGTGCACGG-CACACCGTCCGGGCCCACCAGGAGCTTCTGGAAGTTCCAGGCGACGTCGC 3303735
Query 83172 TGCGGCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGT 83231
|||||||||||||||||||||| | ||||| | ||||| ||||||| | |||||
Sbjct 3303734 TGCGGCACACTGGAGACCAGGCGAGGAGCTTGTGGTCGGTCACGAGGGCAGGGGCGTCGT 3303675
Query 83232 CGCTAGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGT 83291
| || |||| |||| ||||| | | |||||||||| | ||||| || ||||
Sbjct 3303674 CACTGGGCGTGCGCAGCGCCTCGC----GGCGGCGAAGAGCCGGGGTGCCTGAGCGCCGT 3303619
Query 83292 TGACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGT 83351
| |||||| ||| | | |||| | | | | |||||| ||| | || ||||||
Sbjct 3303618 TCCCCTCGCCCTTGGCCAGGAGCCTGAGATCCAGCTCGAGCCCGCCGTCTGGTTGGACGT 3303559
Query 83352 GCTTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTG 83394
| | ||| || ||||| |||||| ||| ||||| ||
Sbjct 3303558 ACCTGAGGCCCTTCAGCATCTCCTCATTCTTGGCATTTTCGTG 3303516
Score = 120 bits (132), Expect = 4e-22
Identities = 158/216 (73%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAG--CTCCTAG 83448
|||| || || ||||| || | || ||| || ||| | ||||| ||| | | | || ||
Sbjct 3303255 CCTGTTGCCCAAACTGCTTGCTCGCGAAGCCCAGCGCGACCAGGCCCGGGGGCCCCCGAG 3303196
Query 83449 G---CGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGA 83505
| |||||||||||||| |||||||| |||| ||| ||||| | | |||| ||| ||
Sbjct 3303195 GTGCCGCCGCTGCAGCTCATTCATCTGGGTGTGGTCCGGGACCATCTTGCCTCCGAGCGA 3303136
Query 83506 CGCTACGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCC 83565
||| |||||||| |||||| || | |||| | | |||| | |||||| ||||| |
Sbjct 3303135 CGCCACGTTCTCAGTGAGCAGCTCCTTGGCCCGCAGGGAGCCCAGGCTCACGGGTTCCTC 3303076
Query 83566 TCCGGTAATCGGGCGTGCTGAGAAGGCGTACACAGA 83601
||||| | |||||| || ||| ||| | |||| ||
Sbjct 3303075 ACCGGTCAGCGGGCGCGCAGAGGAGG-GGACACGGA 3303041
>seq8154
Length=1028479
Score = 129 bits (142), Expect = 7e-25
Identities = 166/227 (73%), Gaps = 4/227 (2%)
Strand=Plus/Plus
Query 83059 CAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGT---ACCTGCG 83115
|||||| || | || |||||||| | ||| ||| | | | |||||||| ||||| |
Sbjct 252843 CAGGGCTTCAACGTTGGGCTCCATGTCCATGGTTAGAAAACAGTGGCTGTGCAACCTGTG 252902
Query 83116 CACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCG 83175
||| ||| | || | ||||||||||||||||| ||||||||||||||||| |||
Sbjct 252903 CACAGGCACACTGTTGGGGCCCACCAAGAACTTCTCCAAGTTCCAGGCCACGTCACTGCA 252962
Query 83176 GCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCT 83235
|||||||| |||||||| | | ||| |||| | ||| ||| | | || ||| |
Sbjct 252963 GCACACTGAAGACCAGGTGAAGTGCTTGGGGCCAGTCATGAGTGCAGGGACGTTGTCATT 253022
Query 83236 AGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCC 83282
| ||||||||| ||||| | | |||||| ||||| | |||||||
Sbjct 253023 GGACGCCGGCAGAGCCTCAGGAAAGAAGGC-AAGAGAGAGTGTGCCC 253068
>seq2791
Length=2825387
Score = 120 bits (132), Expect = 4e-22
Identities = 192/269 (71%), Gaps = 10/269 (4%)
Strand=Plus/Minus
Query 50410 GCACCTGCGCAAGATGTACGGCGCAAGCAG---GTCTATCTACAACTTCGCTGTGCGTAT 50466
||| ||||||| || |||| |||||| ||| || |||||| || || |
Sbjct 143641 GCAGCTGCGCAGCATCTACGA---AAGCAGCCTGTCCATTGGCAACTTTGCCTCACGCCT 143585
Query 50467 GCTCGTGTACATGTTTCCAGAGCTCTTTACTGCGGAGAACCTGCACACGCACTTCAACTG 50526
||||||| || |||| || |||||||| || |||||||||| || ||| | ||||||
Sbjct 143584 GCTCGTGCACCTGTTCCCCGAGCTCTTCACCCACGAGAACCTGCGCAAGCAGTACAACTG 143525
Query 50527 CTACGGCTCCATGGGCAAGC-GCAGGCTCGACCCGCTACGCCTGCGCTTGCTCCGGCACT 50585
| ||||||| |||||||| |||| || |||||| ||| | | |||| ||||
Sbjct 143524 CAGCGGCTCCCTGGGCAAGAAGCAG-CTGGACCCGTCCCGCATCAAGCTCATCCGCCACT 143466
Query 50586 ATGTGCAGTTGCTGCACCCGGCGGCGCGCAACGAGCGCGTGTGGATCACAA-AGTTCCTG 50644
| |||||| |||| ||||| ||| || || ||||| |||| ||| ||||| ||
Sbjct 143465 ACGTGCAGCTGCTCTACCCGCGGGCCAAGAATGACCGCGTCTGGA-CACTGGAGTTCGTG 143407
Query 50645 GCGTGCCTGGACGAGCGCTGCCGGCGCCG 50673
| |||||||||||||||||||||||
Sbjct 143406 GGCAAACTGGACGAGCGCTGCCGGCGCCG 143378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 608563075298520
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